Vibrio cholerae O1 El Tor MS6: MS6_A0258
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Entry
MS6_A0258 CDS
T03666
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
vcs
Vibrio cholerae O1 El Tor MS6
Pathway
vcs00260
Glycine, serine and threonine metabolism
vcs00460
Cyanoamino acid metabolism
vcs00630
Glyoxylate and dicarboxylate metabolism
vcs00670
One carbon pool by folate
vcs00680
Methane metabolism
vcs01100
Metabolic pathways
vcs01110
Biosynthesis of secondary metabolites
vcs01120
Microbial metabolism in diverse environments
vcs01200
Carbon metabolism
vcs01230
Biosynthesis of amino acids
vcs01240
Biosynthesis of cofactors
vcs04981
Folate transport and metabolism
Module
vcs_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
vcs00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
MS6_A0258
09102 Energy metabolism
00680 Methane metabolism
MS6_A0258
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
MS6_A0258
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
MS6_A0258
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
MS6_A0258
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
MS6_A0258
Enzymes [BR:
vcs01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
MS6_A0258
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Motif
Pfam:
SHMT
Aminotran_1_2
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
BAP04517
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Position
2:complement(289265..290572)
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AA seq
435 aa
AA seq
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MNANLNKAYPNVSLENFFSTPLAATNDAVFAAIQAEYTRQNEQIELIASENIVSKAVMQA
QGTCLTNKYAEGYPGRRYYGGCEHVDSVEQIAIERAKMLFQCQYANVQPHSGAQANGAVM
LALLQPGDTIMGMSLDAGGHLTHGARPALSGKWFNAVQYGVDRQTLEINYDSVRALALEH
KPKMIIAGGSAIPRTIDFAQFRSIVDEVGALLMVDMAHIAGLVATGAHPSPLPHAHVVTT
TTHKTLRGPRGGMILTNSEEIHKKINSAVFPGLQGGPLMHVIAAKAVAFGEALGPEFRTY
IDSVIDNAKVLAEVLQTRGCDIVTGGTDTHLMLVDLRPKGLKGNQVEQALERAGITCNKN
GIPFDEEKPMITSGIRLGTPAGTSRGFGREEFKLIGEWIGDVLDGLVASPEGNPDVEQQV
RKQVKALCQRFPLYQ
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcaaatctaaacaaagcttatcccaacgttagccttgagaacttcttctctacc
ccactggcggcgaccaacgatgcggtatttgccgccattcaagctgaatacacccgccaa
aatgaacagatcgaactgattgcctctgaaaacatcgtctctaaagccgtaatgcaggcg
caaggcacttgcctgactaacaaatacgccgaaggttatcccggccgtcgttactacggc
ggttgtgagcatgttgacagcgttgagcagattgctatcgaacgcgccaaaatgcttttt
cagtgtcaatacgcaaacgttcaaccacactcaggcgctcaagccaatggcgctgtgatg
cttgctctgctgcaaccgggcgacactattatgggtatgtcgctagatgcaggcggtcat
ctcacgcatggtgcgcgccctgctctttcaggtaaatggttcaatgcggtgcaatacggt
gtggatcgccaaaccctcgaaattaactacgattctgttcgtgcactggcgttagagcac
aaacccaaaatgatcatcgcaggcggcagtgccattccccgcactatcgattttgctcaa
tttcgctcaattgtggacgaagttggcgcgctgttgatggtcgatatggcgcacattgcc
ggattggtagcaactggcgcacatccaagcccattgccgcatgctcatgtcgtcaccact
accacacacaaaactctacgtggcccgcgcggcggcatgattttgaccaacagcgaagag
atccacaaaaagatcaattctgcggtgttccccggtttacaaggtggcccactgatgcac
gtgattgccgctaaagcagtggcatttggtgaagcgctcggccctgaattccgtacttat
attgattcggtgatcgataacgcaaaagtgctggctgaagtgttgcaaactcgcgggtgt
gacattgtgactggcggaacggatacgcatctcatgttggtcgaccttagacctaaaggt
ttgaaaggcaaccaagttgaacaagccttagagcgtgccgggatcacgtgtaacaaaaat
ggcatcccatttgacgaagagaagcctatgattacatcgggcattcgtttaggtacgcct
gccggaaccagccgtggtttcggtcgtgaagaattcaaactcatcggtgagtggattggg
gacgttctggatggtttggtggccagcccagaaggcaacccagacgttgagcaacaagtg
cgtaaacaagtgaaagcactgtgccaacgcttcccgctctatcaatag
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