Vibrio coralliilyticus OCN014: JV59_01345
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Entry
JV59_01345 CDS
T03497
Name
(GenBank) pseudouridine synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
vct
Vibrio coralliilyticus OCN014
Brite
KEGG Orthology (KO) [BR:
vct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vct03016
]
JV59_01345
Enzymes [BR:
vct01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
JV59_01345
Transfer RNA biogenesis [BR:
vct03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
JV59_01345
Prokaryotic type
JV59_01345
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AIS53828
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All DBs
Position
1:257540..258586
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AA seq
348 aa
AA seq
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MTDILSSLAYLNGKPQATGKLKAQPQHFQVNEDLGFAFTGAGEHLMVRIRKTGENTSFVA
NELAKACGVKSKDVSWAGLKDRHAVTEQWLSVHLPKGDIPDFRAFLSQHPSIEIVETSRH
NKKLRPGDLIGNEFIITLTEVSDVEDVLVRLESVRQHGVPNYFGSQRFGNNGNNINEARR
WGRENVRTRNQNKRSLYLSAARSWIFNNIVSQRIEQDVFNLAVEGDCIQTSEGVVSAESE
ALAELNEAIKQGDAQITAAMAGDNALPTTEKALDLEQPHLDAEPDLMALIRGNRMRHDRR
PVALKPQDLSWSVEQDAITLRFSLDAGCFATAIIRELIQEQEVERSYE
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgactgacattttatcttcacttgcctatttgaatggaaaacctcaagccacggggaag
ttgaaagcccagccgcagcattttcaggttaacgaggatcttggttttgcctttactggc
gcaggagagcatctgatggtgcgtatccgtaagacgggagagaacaccagcttcgttgcg
aatgaactggcgaaagcttgtggcgtgaaatcgaaagatgtcagctgggctggtttaaaa
gatcgtcatgctgtgactgagcagtggttaagtgttcatctgcctaaaggggatattcct
gatttcagagcatttcttagccaacacccaagtattgagattgttgaaaccagccgccac
aacaaaaaactacgcccgggtgacttaatcggaaatgaattcatcatcacgttgacagaa
gtaagtgatgtcgaagatgtacttgtgcgactggaatcagtccgccaacacggtgttcca
aattattttggtagtcagcgtttcgggaacaacggtaacaatatcaatgaagcaagacgt
tggggccgtgagaatgtgcgcactcgaaatcaaaacaaaagaagcttgtatctttcggca
gcacgctcgtggatcttcaacaacatagtgtcacagcgcattgaacaagacgtgtttaat
ctggctgtagaaggtgattgtattcagacatctgagggagttgttagtgctgaatcagaa
gcactggcagaacttaacgaggccattaagcaaggcgatgctcagatcacggcagcgatg
gcgggtgataatgctttgcctactacagagaaagcgctggatttggaacagccccacctg
gatgcggaacctgatttgatggctcttatccgcggaaatcgcatgcgccatgaccgccgt
cctgtagcgctaaaacctcaggatctctcttggagtgtagagcaggacgcgatcacactg
cgattctctttggatgctggctgcttcgccaccgcaatcattcgtgagcttattcaggaa
caggaagtggagcgcagctacgaatga
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