Vibrio coralliilyticus OCN014: JV59_01365
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Entry
JV59_01365 CDS
T03497
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
vct
Vibrio coralliilyticus OCN014
Pathway
vct05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vct00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
JV59_01365
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
vct03021
]
JV59_01365
Transcription machinery [BR:
vct03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JV59_01365
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
AIS53832
UniProt:
A0A097AVA5
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All DBs
Position
1:260951..261934
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AA seq
327 aa
AA seq
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MSISNTATKVEEFELEPTMESIQANGLTTANRTQAEDAKEEFDASTKSLDATQLYLGEIG
FSPLLTAEEEVLYARRALRGDEAARKRMIESNLRLVVKISRRYSNRGLALLDLIEEGNLG
LIRAVEKFDPERGFRFSTYATWWIRQTIERALMNQTRTIRLPIHVVKELNIYLRTARELS
QKLDHEPTAEEIATQLDKPVDDVSKMLRLNERISSVDTPIGGDGEKALLDIIPDVNNSDP
EVSTQDDDIKSSLIHWLDELNPKQKEVLARRFGLLGYEPSTLEEVGREINLTRERVRQIQ
VEGLRRLREILIKQGLNMESLFSMNEE
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atgagtatcagcaatacagcaacgaaagtcgaagagttcgagcttgaaccaacaatggaa
tcgattcaggcaaacgggcttactaccgccaaccgcacccaagcagaggacgccaaagag
gagtttgacgcttccacaaaaagcttggatgccactcaactttacttgggagaaattggt
ttctctccactactcaccgcagaagaagaagttttgtacgctcgccgtgccctaagaggt
gatgaagctgcgcgtaaacgaatgattgaaagtaatcttcgcttagtggtgaaaatttcc
cgtcgatacagcaaccgtgggcttgctctgcttgatctgattgaagaaggcaacttaggc
ttgattcgcgcggttgaaaagtttgacccagagagaggattccgattctcgacctatgct
acttggtggatccgtcaaacgattgaacgtgctttgatgaatcaaactcgcaccatacgt
ttgcctattcatgtggtcaaagaactgaacatctatctgcgtactgctcgtgagttatca
cagaagctggaccatgaaccaacagcagaagagattgctacacaactcgacaagccagtc
gacgatgtcagcaagatgctacgcctcaacgaacgaattagttctgtagacacccctatc
ggtggtgatggtgaaaaagcactgctagatattattcctgatgtgaacaactctgatcct
gaagtgtccacacaagacgatgatatcaaatcttcattgatccattggttggatgaactg
aatcctaagcagaaagaagttttagcacgtcgttttggattgctgggctacgagccgtca
acactggaagaagtaggacgcgaaattaacctaactcgtgaacgtgttcgtcagattcag
gttgaaggcctacgccgtttaagagagatcctgatcaaacaaggtctgaacatggaaagc
ctgttcagcatgaacgaagagtaa
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