Vibrio coralliilyticus OCN014: JV59_02045
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Entry
JV59_02045 CDS
T03497
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
vct
Vibrio coralliilyticus OCN014
Pathway
vct00470
D-Amino acid metabolism
vct00550
Peptidoglycan biosynthesis
vct01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vct00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
JV59_02045 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
JV59_02045 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vct01011
]
JV59_02045 (murD)
Enzymes [BR:
vct01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
JV59_02045 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
vct01011
]
Precursor biosynthesis
Amino acid ligase
JV59_02045 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MurD-like_N
Mur_ligase_M
Mur_ligase_C
Pyr_redox_2
DAO
NAD_binding_9
NAD_binding_8
Thi4
Motif
Other DBs
NCBI-ProteinID:
AIS53958
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All DBs
Position
1:430086..431405
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AA seq
439 aa
AA seq
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MDRWQNVESVVVVGLGITGLSVVKYLAKLPYNLTIRVIDTRENPPGSEALPQSVELHAGG
WNSDWLLNANLVVANPGIALATTEIQQALNAGVQVVGDIELFAWQVDKPVVAITGSNGKS
TVTDLTGIVANAAGVKTAIGGNIGVPALDLLDQDADLYVLELSSFQLETTSSLALKAAAF
LNLSEDHMDRYDDMEGYRQAKLRIFEQAQACIVNADDPATYPDNTDASLVEFSLEKSCEF
HVKVVEGIEYLCHQDAKILASDELSLVGRHNVANALVVLALLEQAGVDISLGIDALKSYN
GLTHRCQVVADNNGVKWVNDSKATNVASTLAALSGLSLSGKLYLLVGGDGKGADFSELQP
ALDQLDVQLCCFGADGDKFLPLHRDAKRFETMEDIVKWASPRMEAGDMIMLSPACASFDQ
FKNFMVRGDAFTALAKHYA
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggatcgttggcagaacgtagagagtgttgtcgttgtagggctcggtattaccgggctc
tcagtcgttaaatacttagcaaaattgccttacaacctcaccattcgcgtcatcgatacc
cgtgaaaatccaccgggaagcgaagctctccctcaaagtgttgagttacatgctggcggc
tggaacagcgactggttgctaaatgcgaatttagtggtggcgaacccagggatcgcgctt
gctactactgaaattcaacaggcgctcaacgcaggtgtacaagtggttggagacatcgag
ctgtttgcttggcaggtggataagccagttgtagccattactggttcaaatgggaaaagc
actgttacggacttgacgggtatcgtcgccaatgctgctggcgtgaagacagcgattggc
ggcaatatcggagtgcctgcgttggatctattagatcaagatgccgacttatatgtgctc
gaactctccagcttccaattagaaaccacttctagccttgctctaaaagccgcggcattc
ctgaatttatcggaagaccatatggatcgttatgacgatatggaaggataccgtcaggca
aagcttcgtatttttgagcaagcacaggcgtgcattgtcaatgcagatgatcctgcgacc
tacccagataatacagatgcgtctctagtcgaatttagccttgaaaaaagttgcgagttc
catgtcaaagtagtggaaggcatagagtatttgtgtcaccaagatgcaaaaatactggcg
tctgacgagctaagcctagtaggaagacacaatgttgctaacgcgctggtcgtacttgcc
ctactcgaacaagcaggtgttgatatttctcttggaatagatgcacttaagtcttacaac
ggtctgacacatcgatgtcaggtcgttgcggataataacggcgttaaatgggtcaatgat
tcgaaagctaccaatgtcgccagcactttagctgcgctgtcaggcttatcactctccggt
aaactctacttgttggttggcggagatggtaaaggcgctgatttttcagagttacagccc
gctttggaccaattggatgtccagctatgctgctttggcgctgatggcgacaagtttctt
cccctgcatcgcgatgcaaaacgtttcgagactatggaagacatagtgaaatgggccagc
ccaagaatggaagccggtgacatgattatgttatctccagcttgcgccagctttgaccaa
tttaagaactttatggtgcgcggcgatgctttcactgcgttagccaaacattatgcgtag
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