Vibrio coralliilyticus OCN014: JV59_02205
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Entry
JV59_02205 CDS
T03497
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
vct
Vibrio coralliilyticus OCN014
Brite
KEGG Orthology (KO) [BR:
vct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vct03400
]
JV59_02205
DNA repair and recombination proteins [BR:
vct03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
JV59_02205
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
DnaB_C
Lon_C
GvpD_P-loop
Rad51
SLFN-g3_helicase
AAA
RecA
AAA_22
AAA_14
AAA_24
AAA_16
nSTAND3
NTPase_1
ABC_tran
AAA_29
Zeta_toxin
AAA_5
Viral_helicase1
Zn_ribbon_Thio2
DAP3
AAA_30
DUF7125
Zn_ribbon_8
AAA_18
zinc_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
AIS56472
LinkDB
All DBs
Position
1:469134..470513
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AA seq
459 aa
AA seq
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MAKAKRAYVCNDCGADFPRWQGQCNACGAWNTISEVRLAASPAAARNERLTGYAGNSGET
QVQTLSEIDLQEVPRFTSGFKELDRVLGGGVVPGAAILIGGNPGAGKSTLLLQTMCYLAS
QMPTLYVTGEESLQQVAMRASRLGLPKDNLKMLSETNVDRICQIAEKEQPKILVIDSIQV
MHVADVQSSPGSVAQVRESATALTRYAKQNNVAVFIVGHVTKDGTLAGPKVLEHIIDCSV
LLDGGTDSRFRTLRSHKNRFGAVNELGVFAMTGQGLKEVSNPSAIFLSRGEEETSGSSVM
VVWEGTRPLLVEIQALVDYSQLANPRRVAVGLEQNRLSLLLAVLHKHGGLQMADQDVFVN
VVGGVKVTETSADLALVMALLSSFRDRALPKDVVVFGEVGLAGEIRPVPSGQERLNEAFK
HGFKKAIVPAANMPKGGIPGMQIHGVKKLSEAIEAFDEL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaggcaaaaagagcatacgtatgtaacgactgtggcgcagactttccgcgttgg
cagggacaatgtaatgcttgtggcgcatggaatacgattagtgaagtcaggttggccgca
tctcctgcagcggcgagaaatgagcgactgactggctacgcaggaaactcgggtgaaact
caggttcaaaccttatccgagattgatttacaggaagttccacgctttaccagcggcttt
aaagagctagaccgagtacttggtggtggcgttgttcccggagcggcgattttgatcggt
ggtaaccctggtgcaggtaaatcgacgctgttgttgcagaccatgtgttatttagcatct
cagatgccgactttgtatgtcaccggtgaggaatcgcttcagcaggtcgcgatgcgcgct
tcccgtctggggttgcctaaagacaatctaaaaatgctgtcagaaaccaatgttgatcgt
atttgtcagattgcagaaaaagaacagcctaagatcttggtgattgactcgattcaggtg
atgcatgttgcggatgttcaatcttcgccgggcagtgtggcgcaagtaagggagtcagcg
accgcgctaacccgttatgctaagcaaaacaatgtcgcggtgttcattgttggccacgtc
accaaagacggcaccttggctgggcctaaagtgcttgagcacatcatcgactgttcagtg
ctgcttgatggtggcacagatagcaggttcagaacgcttcgtagtcacaagaaccgtttt
ggtgcagtgaatgagttgggcgtgttcgccatgacagggcaggggttgaaagaagtcagt
aacccttcagctatttttctttctcgtggtgaggaagagacctcaggcagctccgttatg
gtggtatgggaaggcactcgtccactgctggtggaaattcaggcactggtggattactcc
cagttggccaacccacgacgtgttgccgttggccttgaacaaaatagattgtcgctgttg
ttggccgttttacataaacatggtggcctgcagatggcggatcaggatgtgtttgtgaat
gtggttggcggggttaaagtaacggaaaccagtgccgatttggctttggtgatggctctg
ctatccagcttcagagatagagcactaccaaaagatgtagtggtttttggtgaagtgggt
cttgctggcgagattcgtccggtacctagcgggcaggaaaggctgaatgaagcatttaaa
catggctttaaaaaggccatcgttccggctgcaaatatgcctaaaggtggtattccggga
atgcagattcacggcgtgaagaagttatcagaagcgattgaggcctttgacgaactttaa
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