Vibrio coralliilyticus OCN014: JV59_15950
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Entry
JV59_15950 CDS
T03497
Symbol
oppD
Name
(GenBank) oligopeptide transporter ATP-binding component
KO
K15583
oligopeptide transport system ATP-binding protein
Organism
vct
Vibrio coralliilyticus OCN014
Pathway
vct01501
beta-Lactam resistance
vct02010
ABC transporters
vct02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vct00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
JV59_15950 (oppD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
JV59_15950 (oppD)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
JV59_15950 (oppD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vct02000
]
JV59_15950 (oppD)
Transporters [BR:
vct02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
JV59_15950 (oppD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
SMC_N
AAA_21
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AIS56580
LinkDB
All DBs
Position
2:complement(13865..14854)
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AA seq
329 aa
AA seq
DB search
MSILSIKDMNVRFKTPDGEVHAVSNLSYNIHKGETLGIVGESGSGKSQSVFALMGLTADN
GIVSGEASFHGENLLSMSKKQLNHIRAEKIGMIFQDPMTSLNPFMKVGKQLAEVLMIHKG
MNRSEANREAITMLDAVRIPSAATRMAQYPHEMSGGMRQRVMIAMALLCKPELLIADEPT
TALDVTVQAQILSLLRDLQSEFHTAILLITHDMGVVAEMCDRVLVMYGGQKMEEADTDSL
FNHPAHPYTQGLLEAIPSITKDMDRLPTIPGNPPSALTERKGCPFKERCNHYRPECNASV
PPFRSLSQHQSLACHVNGPQAVTQITRRA
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgagtattttatcgatcaaagatatgaatgtgcgtttcaaaacgcctgatggtgaagtt
catgccgtcagtaatctgtcctacaacatccacaaaggtgaaacactgggcattgttggt
gaatctggctcagggaagagtcagtccgtttttgccttgatgggtctgactgccgataac
ggtattgtttcgggtgaagcgagttttcatggcgaaaacttactcagcatgtccaaaaaa
cagcttaaccacatccgcgcggaaaaaatcggcatgatctttcaagatccgatgacatcg
ctgaacccgtttatgaaagtcggtaaacaacttgccgaagtgttgatgattcacaaaggc
atgaaccgtagtgaggcaaaccgcgaagcgatcaccatgcttgatgccgtcaggatccct
tccgccgccactcgtatggctcaataccctcacgagatgtctggtggcatgcggcaacgt
gtgatgatcgcgatggccttattgtgtaagccggaacttctgattgctgatgagcccacc
accgctttggacgtcacggtacaagcgcagattctctctctattacgcgatctacaatct
gaatttcacacagcaatcttgttaattactcacgacatgggcgtggtcgctgagatgtgc
gaccgcgtgttggtcatgtacggtggacagaagatggaagaagcggatacagactctctg
ttcaaccaccctgctcatccgtatacccaaggcctactcgaagctatcccttccatcacg
aaagatatggacaggcttccgaccattcccggtaacccaccgagcgctctcacagaacgt
aaaggctgcccgtttaaagagcgctgtaatcactatcgaccagaatgtaacgcgtcagta
ccaccatttcggtcactatcacaacatcagtctctggcttgccatgttaatgggcctcag
gccgttactcagataacgcgtcgagcatag
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integrated database retrieval system
