Vibrio coralliilyticus OCN014: JV59_18640
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Entry
JV59_18640 CDS
T03497
Name
(GenBank) exonuclease SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
vct
Vibrio coralliilyticus OCN014
Brite
KEGG Orthology (KO) [BR:
vct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vct03400
]
JV59_18640
DNA repair and recombination proteins [BR:
vct03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
JV59_18640
Archaeal homologous recombinant proteins
JV59_18640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
SMC_N
AAA_21
Trimer_CC
AAA_16
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AIS57061
LinkDB
All DBs
Position
2:602168..605209
Genome browser
AA seq
1013 aa
AA seq
DB search
MKPLSLTMQAFGPFASTETIDFTLLGSNPLFLINGPTGSGKTSILDAICFALYGQTTGNE
REGMQMRCDMAALSLPTEVVFEFALKEKRYRVTRSPDQLAPKARGEGTTTRKHTASLYEI
TNEEHLITSKTALVKVEVAELIGLNETQFRQVMVLPQGKFRELLLASSKEREEIFGQLFQ
TDIYKKIEFALKDKASAISKSKDEFDNQIRGALQVAEASTEQELTEQLDVVAKLLEEVSL
SEKAALEKLNKNKEAQQKANQLQGEFEKLQSAEKALSEHSEKSDSNAQIQQKLATAQQAS
KLDVPYTNWTSLSKQVHDLNEKGSSLEKALQLSNVAIEEHKQQLNTFTQQAQSIPTLTDK
LYQLEGIKAKLNEKLELDKNLKDSATKKQEFNSTLIKYQAHKEKLSQQASKALQELENAK
LAIADKATVESELARLQRLTADLNKLQLLSKELVTLEQGLQPIEARVQQLKLDWQEHSKQ
ADDYEMRWHSAQAAVLARKLQQGLPCPVCGSAEHPNPAAFNGQEVTKEQVEFHRNQERQS
LHSLNEQTRIVEQQNVLISRQKTQIEAFKQELGENRDLSLELIQKQHSEWQAKLAGLASI
NLEQMELEVTTLNQRCENGESEINRLREEMSAHDATVQVLQQRLEALVQSIGEKHQAVES
VDNDYKQTKASIDTLQKQLEQANEQQQRLAKYHAELEGQRQSNTQLLAEAKRNLDKAETE
WHVSIEKAQFSDEQAYLNAKATDNQLEFWKASVEAYAQTEAKLKQTLEDLKHALKDHQAP
DLVELGKLVELSSQEYVDARNALDTTRSKFERFDKVRRDIALLHEKNAELEAEYKVYGTL
YDVASGKTGSRVSLHRFVLGVLLDDVLIQASQRLSLMSKGRYVLARKTEGFKGAAGRGLD
LMVEDSYTGKNRDVATLSGGESFMAALSLALGLSDVVQSYSGGIRLDTLFIDEGFGSLDP
ESLDLAIQTLIDLQQSGRTIGLISHVSELKEQMSLRIDVKSSRVGSELKVNVA
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccattatcactgacaatgcaggcatttggtccttttgctagcactgaaactatc
gactttacactgcttggttccaatccactgtttttgattaacggcccaacaggttcaggt
aagacttctattctagatgccatttgttttgctttgtacggccaaacaacgggcaatgaa
agagaagggatgcagatgcgctgtgatatggcagcgctttcattaccgaccgaagtggtg
ttcgaattcgcacttaaggaaaagcgctacagagtcacgagatcacccgatcaactagca
cctaaagcccgaggtgaaggcacaacaacacggaagcacactgcctctttgtatgagatt
acgaatgaagagcatctgataaccagcaagacagcgctggttaaagttgaggtcgcagaa
ctgattggtctgaatgaaactcagtttcgtcaggtgatggtgttaccacagggtaagttc
cgtgaactcttgcttgcaagctccaaagagcgagaagagattttcggtcaattgttccag
acagatatctacaagaaaatcgagtttgcacttaaggacaaagcgagcgctatcagcaaa
tcaaaagatgagtttgataaccagattcgcggtgctctgcaagtggcagaagccagtact
gaacaggagttaacggagcaacttgatgttgtcgctaagctgcttgaagaggtgagcttg
agtgaaaaggctgcccttgaaaagttaaataaaaacaaagaggcacaacagaaagctaac
caattacaaggtgaatttgagaagctgcaaagcgcagagaaagcactgtcagagcatagc
gagaaaagcgatagtaatgctcaaattcaacaaaaattggctaccgctcagcaagcttct
aaattagacgttccttacaccaactggacttcgctctcgaaacaggtccatgacctgaat
gaaaaaggcagttctcttgagaaagcgttgcaactttcgaatgttgcgatagaagagcac
aaacagcagttgaatacgttcacgcagcaagcccaatcaattccgacattgacagataag
ctttaccaactggaaggcatcaaagctaagctaaacgaaaagttggagttggataaaaac
ctgaaagactctgccactaagaaacaagagttcaattcgaccttaatcaaatatcaggca
cacaaagaaaagctttcgcaacaagcatctaaagctctacaagaactcgagaatgcgaag
ttggctattgcagataaagcgacggtagagtctgaacttgctcgattacagcgccttact
gccgatctcaataaactgcagttgctgtccaaagagttagttactttagagcaagggctg
cagcccattgaagctcgtgtacagcagttgaagcttgattggcaagagcatagcaagcaa
gcggatgactatgaaatgcgctggcacagcgctcaggcggcagttcttgcccgtaaactt
cagcaaggcctgccttgtccggtgtgtggcagcgctgagcatccaaacccagctgcgttt
aatggccaagaagtgaccaaagaacaagttgaatttcatcgtaaccaagagcgtcagtca
cttcactctctcaacgagcaaactcgcattgttgaacaacagaatgtccttatctcacgt
caaaaaactcaaattgaagcatttaagcaagagctgggggaaaatagagacctttctttg
gagctcatacagaagcagcactctgagtggcaagccaagttagctggattggcttcaatt
aaccttgaacagatggagttggaggttacaacgctcaaccaacgttgtgaaaatggtgag
agtgaaatcaatcgcctgagagaagaaatgtctgctcatgacgcaacagttcaagtgctg
caacagaggctcgaggcactggtacagtccattggcgagaaacatcaggcagtggaatct
gtcgataatgattataagcaaaccaaagcgtcaatcgatactttgcaaaagcaactggag
caagccaatgaacagcaacagcgactcgctaagtatcatgctgagctcgaagggcaaaga
cagagtaatactcagcttttagcggaagcaaagcgaaacttagataaagcggaaacggaa
tggcatgtctcgattgaaaaagcacagttttctgatgaacaagcctatctcaacgcgaaa
gcgacggacaatcaattagagttttggaaagcatcagtggaagcttacgcgcaaaccgaa
gccaaactaaagcagacgttagaggatttgaaacatgcgctcaaagaccaccaagcgcct
gacttagttgaactaggaaaacttgttgaattaagcagccaagagtacgttgacgcgaga
aatgcactggatacgactcgctcgaaatttgaacgatttgataaggttcgtcgtgatatt
gccttactacacgaaaaaaatgctgaattagaggctgagtacaaggtgtacggaactctg
tatgacgtcgctagtggtaaaaccgggagccgcgtgagcttgcatcgatttgttcttggt
gtattactggacgatgtgcttattcaagcttctcagagacttagcctgatgagtaagggg
cgctacgttcttgcgcgtaagaccgaaggcttcaaaggtgcggcaggacgaggcttggat
ctgatggtagaagatagttacacaggaaaaaatagggacgttgccaccttatcaggaggg
gagtctttcatggcagcgctgtctttggctcttggtttatccgatgttgttcaatcgtac
agcggcggtatcaggttggataccctgtttatcgatgaaggttttggcagcttagatcca
gagtcgttagatctcgccatccagacgctaattgacctgcagcaaagtggtagaaccatc
ggtttaatttcccatgttagtgagcttaaagaacagatgtcattgcgtatcgatgtgaag
tccagccgagtgggaagcgaattgaaagtaaatgtcgcataa
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