Vibrio coralliilyticus OCN014: JV59_18775
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Entry
JV59_18775 CDS
T03497
Name
(GenBank) DEAD/DEAH box helicase
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
vct
Vibrio coralliilyticus OCN014
Brite
KEGG Orthology (KO) [BR:
vct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vct03009
]
JV59_18775
Enzymes [BR:
vct01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
JV59_18775
Ribosome biogenesis [BR:
vct03009
]
Prokaryotic type
rRNA helicases
JV59_18775
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
AAA_19
AAA_30
DUF4577
Helicase_C_2
DUF1529
AAA_22
PRAI
UvrA_inter
Motif
Other DBs
NCBI-ProteinID:
AIS57087
LinkDB
All DBs
Position
2:635452..636828
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AA seq
458 aa
AA seq
DB search
MTTSFKSLNLRSELIETLNSLNYTEMTPIQQQALPIVLEGKDVIGQGKTGSGKTAAFTLG
LLSNLNVKRFRVQTLVLCPTRELADQVAKEVRTLARGIHNIKVLTLCGGMPMGPQIGSLE
HGAHILVGTPGRILDHLSKGRINLAEMNTLVLDEADRMLEMGFEEAIDAIIDEAPQDRQT
LLFSATFPKNIESLTSKVMRDPQMIKVESTHQTTTIEQRFYKLNTTEERDDALEALLLTH
KPESSVVFCNTKKEVQKVTDELSHRGFSVVELHGDMEQREREQALTMFANKSVSILVATD
VAARGLDVDNLDAVFNFELSRDPEVHVHRIGRTGRAGSRGVAFSFYSEKEEYRVARIDEY
MDIAISPAVLPEKPVERPFYPKMQTIQILGGKKQKVRAGDILGALTKQAGLDGKKIGKIN
ILPMVSYVAVEHEIVKPALKQLQNGKMKGRNFKARVMK
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
gtgacaacttcatttaagagcctgaatcttagaagtgaactgatagagacactgaacagc
ctcaactacacggaaatgacaccgatacaacaacaggcgttgccgattgttcttgaaggt
aaagacgtgattgggcagggcaagacaggatcgggtaaaacagcggcgtttacacttgga
ttactgagtaatttgaacgttaaacgctttcgtgttcagaccttggtactgtgtccaact
cgcgagctcgccgatcaggtagcgaaagaggttcgtacactggcacgtggtattcacaac
atcaaagttctcacgctgtgtggtggcatgccgatggggcctcaaattggctcactagag
catggcgcgcatatcttggtgggtacgcctgggcgtattctagatcacctttctaaaggt
cgtatcaatctagctgagatgaacactttggttctggatgaagctgatcgaatgttggaa
atgggctttgaagaggctattgacgccatcattgacgaagcacctcaagacagacaaacc
ttattgtttagtgcgacgttcccgaaaaacattgagtcattaacatctaaagtgatgcgt
gatcctcaaatgatcaaagtggaatcaacgcatcagacaaccaccatcgagcagcgattc
tacaagttaaacacaacagaagagcgtgatgatgctctggaagcgctattattgacacac
aaacctgagtcgtcagttgtgttctgcaataccaagaaagaagtccagaaggtgaccgat
gagctaagccaccgtgggttcagtgttgttgagcttcatggtgatatggagcagcgtgaa
cgcgaacaggcattgaccatgtttgctaacaaaagtgtctcaattcttgtagcgaccgac
gttgctgcacgtggccttgatgtagataacctagatgcggtgttcaattttgaattgtca
cgcgaccctgaagtgcacgtccatcgaattggccgtactggtcgtgcaggttctagaggt
gttgcgttcagcttctacagtgagaaagaagaatatcgtgtcgcacgtattgatgaatac
atggatatcgctatctctccagctgtactaccagaaaaaccagttgagagacctttctac
cccaagatgcagacgattcaaatccttggcggtaagaagcagaaagttcgtgctggagac
atattaggtgctctgacgaaacaggctgggttggatgggaagaaaatcggcaagatcaac
attcttccaatggtctcttatgtggctgttgaacacgagattgtaaagccagcattgaag
cagcttcaaaacggtaaaatgaaagggcgtaactttaaagctcgtgtgatgaagtaa
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