KEGG   Vibrio coralliilyticus OCN014: JV59_19760
Entry
JV59_19760        CDS       T03497                                 
Name
(GenBank) transcriptional regulator
  KO
K11914  sigma-54 dependent transcriptional regulator
Organism
vct  Vibrio coralliilyticus OCN014
Brite
KEGG Orthology (KO) [BR:vct00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:vct03000]
    JV59_19760
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vct02044]
    JV59_19760
Transcription factors [BR:vct03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    JV59_19760
Secretion system [BR:vct02044]
 Type VI secretion system
  Imp/Vas secretion system related proteins
   JV59_19760
SSDB
Motif
Pfam: Sigma54_activat AAA_lid_14 Sigma54_activ_2 HTH_8 GAF AAA_5 HTH_50 GAF_3 AAA_2 AAA_3 TsaE YabA
Other DBs
NCBI-ProteinID: AIS57262
LinkDB
Position
2:863963..865600
AA seq 545 aa
MRSANQNDLSNALLAISQSLADRTQLAQTLDAVLTAARQMTFSKHGIIYVLDQTGQALIP
SIVHHNEQALTSHPWQPLSFEQTSQTDPFNYAIQNGEVVLINELYQYNGYDCEAVYETEL
ALGIKSANLLAWPLVDDSGKTIGLLALFDLSVIDNESALTAFCNMAANSIRQAVWLEEYG
HMIKSLSADNAALVRENQHLKQRKQSHYKGPIAESEQMLEVLRRLEKVLTLPVDVLLRGE
TGAGKEVIAKYIHENSNRADQPLIVQNCAAIPEQLLESELFGHKKGSFTGADKDKIGLFE
AAHGGTLFLDEIGDMPLLLQAKLLRVLQERKVRPVGASKEVEVDVRVVAATHCHLMDKIK
NGEFRADLFYRLNVFPITLPPLREREADILPLAEHFVKQSASNLGLSQAPGFSANVQKQL
QEYSYPGNVRELKNIVERALLLSDFETISQIEFGEAAALAEAHQTKRAMVEVMQQPVVES
VQQDAVEQADYSKGLKEAVGEYEKTVILDCLNASNWQIKRAAEQLSLPVSTLSHKMKKYD
ISAAG
NT seq 1638 nt   +upstreamnt  +downstreamnt
atgcgttcagctaatcagaacgacctgagtaacgcgcttttagcgatcagccagtctctg
gctgatcgtactcagcttgcgcaaactttggacgcggtgctcacagcagcgcgtcagatg
acgttttccaaacatggcatcatctacgttctcgatcaaactggtcaggcattgattcca
agcattgttcaccataacgaacaggctctcacctctcatccttggcaacctctatcgttt
gaacaaaccagccaaacggatccattcaactacgcaatacagaatggcgaggttgtcttg
attaatgagttgtatcagtacaacggttacgattgtgaagctgtctatgagacggagcta
gcgcttggcattaaaagcgccaacctgctcgcttggccactcgttgatgacagcggtaag
actattggtctattagctctattcgacttgagcgtaattgataatgaatcggctctaaca
gcattttgcaatatggcagcaaacagtattcgacaagcagtctggcttgaagaatacggc
catatgattaaaagcttgagcgccgataacgcagctctagtacgcgaaaaccaacatctc
aaacaacgcaaacaaagccactacaaaggcccgattgcggaaagtgaacagatgctcgaa
gtgctacgtcgtttagagaaggtactgacacttccagtagacgttctactacgaggtgaa
acaggcgcaggtaaagaggttatcgcgaagtatattcacgaaaactcgaaccgcgcggat
cagccgttaatcgtccagaactgtgctgccataccggaacagctacttgaatctgagctg
tttggtcataaaaaaggatcatttactggtgcagacaaagacaaaataggtttgtttgaa
gcggctcatggtggaaccttatttctcgatgagattggcgacatgccattgttgcttcaa
gctaagctattacgtgttttgcaagagcgtaaagtgcgtccggtgggtgccagcaaggaa
gtcgaagtggatgtccgcgttgttgccgctacgcattgtcatttgatggataaaatcaag
aatggtgaattccgtgcggacttgttctatcgtctgaatgtattcccgataacgctccct
ccgttacgcgagcgcgaagctgacattttgccactcgctgaacacttcgtgaagcaaagc
gcatctaacttgggcctttcacaggctccagggtttagtgcaaacgtgcaaaaacagctt
caggagtactcataccctggtaacgttcgtgagctaaaaaacatcgtcgagcgggctctg
ttgctttctgacttcgaaaccataagccagatagagtttggagaagcggcagcacttgct
gaagctcatcagacgaaacgtgctatggttgaggtgatgcaacagcctgtcgttgagagt
gtgcagcaagatgcagtggaacaagcagactattctaaaggccttaaagaagccgtagga
gagtatgagaagaccgtcatccttgattgtctgaacgcatcaaactggcaaatcaaacgc
gctgcagagcagctctcactgcccgtcagcacgttaagccacaagatgaagaagtacgat
atttccgcagcgggttaa

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