Vibrio coralliilyticus OCN014: JV59_24685
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Entry
JV59_24685 CDS
T03497
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
vct
Vibrio coralliilyticus OCN014
Pathway
vct03420
Nucleotide excision repair
vct03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vct00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JV59_24685
03430 Mismatch repair
JV59_24685
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vct03400
]
JV59_24685
Enzymes [BR:
vct01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JV59_24685
DNA repair and recombination proteins [BR:
vct03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JV59_24685
MMR (mismatch excision repair)
Other MMR factors
JV59_24685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
AAA_30
AAA_11
Viral_helicase1
UvrD_C_2
UvrD_C
ResIII
AAA_22
SirA
DEAD
Motif
Other DBs
NCBI-ProteinID:
AIS58245
LinkDB
All DBs
Position
pOCN014:complement(75161..77332)
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AA seq
723 aa
AA seq
DB search
MDQSVSTPLEKIKECIELEQSFVLQGGAGSGKTETLKRTVRFCSENHPDKKIVCITHTNK
AVDEIVERVGSGIEISTIHSFISKLIKPYKRNLLKLLPELFYLPLFEELGIDHYNGDDKT
RKTEEHKRFKALHESLANRRSIVLQEGTAKVTGKREYDKDPSSFNTSLNNDIEQLNEAIA
ETIKQHHFNEVVYNDTPFDSFKSATFGHDGLIKIAALLFSQYSIFGRIVRDKYDCIFIDE
YQDTDENIIHSLIYSTPDKGLTIGLFGDSEQAIYEGGIGSAKRFIDDGQLTLIEKEDNFR
CSRQVIDVANKFRSDGLTQKVALKETNGIMETAEEREGSATFYYSIKPPAPEKPASPKKS
DSDEIKSVYQIAKAQYDQQLEEHKLDISRRLEDLVVCAQADIGENVLLKLPNKSVARDAS
FGNLYELFDGRFRDTREEIKKHLDRLQFGQLAELLQLFNSSADDNRAYNKLIGLLKKQGL
FIKTKQDKRELHHMLQELSSSNEAAYTVMNRAVIAGLISLSESHQSYLKRKDSELERIDK
DNNIYAFKKLQESGCNTKKQICDYINQNNGTDLTVEAIEEHYDQLAKDVLSEKFYSGLFG
SDLSFNEVLAFYKYEGDDSNFMTMHKTKGTGIENVVVVLDEFNWSKYDFGSCFRSETDNP
TRQALTRKLLYVACSRAKKNLRCVRLLDSSGELANIENYFDNLVPVNLQKPRQPSLCVHG
SHQ
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggatcagtcagtaagtacacccttagaaaagataaaagaatgtatagagcttgaacaa
tcctttgttttacaaggtggtgctgggagcggtaagacagaaacgttaaaacgaacagtc
aggttttgttctgaaaatcaccctgataagaaaattgtttgtattactcatactaataaa
gctgttgatgaaatagtcgaacgtgtgggttcagggattgaaatatctacaatccattcg
tttattagtaagcttattaaaccatacaaacgtaatcttttaaaactactcccagagctc
ttttaccttcctttattcgaggagttgggtattgatcattacaatggtgatgataagact
agaaagactgaagagcataagagatttaaagcactgcacgaatctttggctaataggcgc
tctatcgtattacaagaaggtacagcaaaagtcactggaaagcgtgaatatgacaaagat
cctagctcatttaatacatcgttaaataatgatattgagcagctaaatgaagcgatagca
gaaactatcaagcaacatcatttcaatgaggttgtatataatgacacgccatttgatagc
tttaaaagtgccacttttgggcatgatggtcttatcaaaatagctgcgctgctatttagt
cagtattctatttttgggagaatcgttcgcgacaaatatgactgtatatttatcgatgaa
tatcaggatactgacgaaaatattattcattcattgatttactctactcctgacaaaggg
ctaaccataggtttgttcggtgacagtgaacaagcaatttacgaaggtgggataggttcg
gcaaaaaggtttatagatgacgggcagttaacgttaattgaaaaagaagacaattttcgc
tgctcacgtcaagtaattgatgtcgcgaacaaatttcgttctgatggtttgactcagaaa
gtggctctaaaggaaaccaatggaataatggaaactgctgaagaacgggagggatcagca
accttttactattcaatcaagcctcctgcgccagaaaaaccagcctctcccaaaaaaagt
gattctgatgaaatcaaaagtgtgtaccaaattgcaaaggctcaatatgaccagcaattg
gaggagcataaacttgatatttctcggaggctggaagatttagttgtttgcgctcaggct
gatattggggagaatgtgttattgaagctccccaataaatcggtggctcgtgatgctagt
ttcggaaatttgtatgagctgtttgatggcaggttccgtgatacacgggaagagataaaa
aaacacctcgatagacttcaattcggtcaacttgctgaattactgcaactttttaatagc
tcggctgatgacaatcgtgcatacaacaagctgataggattgttgaagaaacaaggtttg
ttcattaaaactaagcaagataaaagagaactgcatcatatgctccaagagctatcttcg
tctaatgaagcggcctatactgtcatgaatcgagctgttattgctggacttatctcgtta
tccgaaagccatcaatcttatcttaaacgcaaggatagcgagctggaaaggattgataaa
gataacaacatttatgctttcaagaaattacaagaatctggatgtaatacgaagaagcaa
atatgtgactatattaaccagaataatggtactgatttgacagttgaagcgattgaggag
cactacgatcaactagcaaaagatgttctgagtgaaaaattctattctggattgtttggt
agtgatctgagcttcaacgaggtcttagcattttacaaatatgaaggcgacgacagcaac
ttcatgacaatgcataaaactaaaggaactggcattgaaaatgttgttgtggttttagat
gaattcaattggtccaagtatgattttggaagttgctttaggtcggagacagataatccg
actaggcaagccctcacaagaaaactgctatatgtggcgtgttccagagcaaagaaaaat
ttacgttgtgtacggcttctagatagttctggcgaattggcaaatatagagaactacttt
gataatctcgtgcctgttaatttacaaaagccacgacaaccatcactctgtgtacatggc
tcacaccaataa
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