Vibrio coralliilyticus OCN014: JV59_26690
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Entry
JV59_26690 CDS
T03497
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
vct
Vibrio coralliilyticus OCN014
Pathway
vct03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vct00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JV59_26690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vct03400
]
JV59_26690
Enzymes [BR:
vct01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
JV59_26690
DNA repair and recombination proteins [BR:
vct03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JV59_26690
Prokaryotic type
JV59_26690
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AIU66006
LinkDB
All DBs
Position
1:452832..453518
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AA seq
228 aa
AA seq
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MNPSLTWQDVIGAEKQQDYFQQTLNFVESERAAGKAIFPPAKDVFNAFRATEFNDVKVVI
LGQDPYHGPRQAHGLCFSVLPGIKTPPSLVNMYKELAQDIDGFQIPAHGYLQSWAEQGVL
LLNTVLTVEQGKAHSHSKTGWETFTDKVIEAVNQHQSGVVFLLWGSHAQKKGRFIDRNKH
HVLAAPHPSPLSAHRGFFGCRHFSQANQILNAQCKATIDWHLPTQVSV
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgaacccgtcactgacatggcaagacgtcattggggctgaaaagcagcaggactatttt
cagcagacgttgaattttgttgaatcggaaagggcagcaggtaaagcgatctttcctccg
gcaaaagatgtgtttaatgcctttcgggcgactgagttcaatgatgtgaaagtcgtgatt
ctgggacaggatccttatcacggccctcgacaggctcatggtctgtgtttctctgtatta
ccaggtatcaagactcctccctctttagtcaatatgtataaagagttagcacaggacatt
gatggttttcagattccggcgcatggttaccttcaaagctgggctgagcaaggtgttctg
ttacttaacactgttcttacggtcgaacagggaaaagcccattcgcattctaaaaccggt
tgggaaacctttacagacaaagtcattgaagcggttaatcagcatcagtctggcgtggtg
tttttgctttggggctctcatgcgcaaaagaaggggcgtttcatcgaccgcaataagcac
catgtattagctgcgccacacccttctccgttgtcagcgcatcgtggatttttcgggtgc
cgacacttttcacaagcaaatcaaattcttaacgcccaatgtaaagcaacgatcgattgg
catctgccaactcaggttagtgtttag
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