Vibrio coralliilyticus OCN014: JV59_28350
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Entry
JV59_28350 CDS
T03497
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
vct
Vibrio coralliilyticus OCN014
Brite
KEGG Orthology (KO) [BR:
vct00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vct03032
]
JV59_28350
03400 DNA repair and recombination proteins [BR:
vct03400
]
JV59_28350
Enzymes [BR:
vct01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
JV59_28350
DNA replication proteins [BR:
vct03032
]
Prokaryotic type
DNA Topoisomerases
JV59_28350
DNA repair and recombination proteins [BR:
vct03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JV59_28350
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Topo_Zn_Ribbon
TOP1_ZnF
Toprim
zf-C4_Topoisom
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
AIU66306
UniProt:
A0A837GCK0
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Position
1:834653..837280
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AA seq
875 aa
AA seq
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MGKSLVIVESPAKAKTINKYLGKDFIVKSSVGHVRDLPTAGQSTGQKAAAVSTKGLSVEE
KARIKKEKDRKALIKKMGIDPFNGWEANYQVLPGKEKVVAELQKLAKDADSVYLATDLDR
EGEAIAWHLREIIGGDEERYKRVVFNEITKNAIQQAFQKPGELSMDGVNAQQARRFMDRV
VGFMVSPLLWKKVARGLSAGRVQSVAVKLLVEREREIKAFVPEEFWDIHADTKTANKTDF
RLQVAQKDGVAFKPSNEAETQSAIAVLEKAAYEVCKREDRPTSSKPSAPFITSTLQQAAS
TRLGYGVKKTMMLAQRLYEAGYITYMRTDSTNLSAEAVETVRGFIGDEYGDAYLPAKPNV
YGSKEGAQEAHEAIRPSDVAVKADDLKGMEADAHKLYSLIWNQFVACQMTPAKYDSTTVS
VKAAEYTLKAKGRILKFDGWTRVQRPLGKNEDQILPAVQVGDKVDLIQLDPKQHFTKPPA
RFTEAALVKELEKRGIGRPSTYASIISTIQDRGYVKVEQRRFYAEKMGEIVTDRLDDSFH
ELMNYEFTSRMEEKLDQIAEGEANWKKVLDNFFGDFTGDLEKAEQDEDHGGMKPNHIVYT
DIECPTCSREMGIRTASTGVFLGCSGYALPPKERCKTTINLGDEEGIINVLEEDVETAAL
RAKKRCPICETAMDAYLIDDKRKLHVCGNNPNCDGYIVEHGEYKVKGYDGPVVECDKCGS
DMVLKNGRFGKYMDCTSETCKNTRKILKNGEVAPPKEDPVHLPELPCENSDAYFVLRDGA
SGLFLAASTFPKSRETRAPLVEELVRFKDRISPKFHYLTTAPEKDPDGLPMVVRFSRKSK
ENYVRSEVDGKPSGYTALYIDGKWEITDKRKKSAK
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgggtaagtcactcgttattgtggagtcgccggctaaggctaaaaccatcaataagtat
ttaggtaaggactttattgttaagtccagtgtgggtcacgtacgcgatctacctaccgca
ggtcagagtaccggccagaaggcagcggctgtctctacgaaaggtttgagtgttgaagag
aaagctcgaatcaagaaagaaaaagaccgcaaagcgctgatcaaaaaaatgggcatcgac
ccatttaacggctgggaagcgaattatcaggtcttgcctggtaaagaaaaagtggttgct
gagctacaaaagctcgcgaaagacgcagatagcgtctatctcgcaaccgatttggatcgc
gagggagaagctatcgcttggcaccttcgtgagatcatcggtggcgatgaagagcgatac
aaacgagttgtctttaacgaaattactaagaacgcgattcaacaagctttccagaaaccg
ggtgagcttagtatggatggcgttaacgcccaacaggcacgccgctttatggatcgtgtt
gtgggctttatggtctcaccactgttgtggaaaaaggtcgcgcgtggcctgtctgctggc
cgtgttcaatcggtggcggtaaaactattggtggagcgtgagcgcgaaatcaaagcgttt
gttccagaagagttttgggatattcacgcggatactaaaactgctaacaaaacggatttc
cgtcttcaggttgcccagaaagatggtgtggcatttaagccgtcgaatgaagctgaaacg
cagtcagcgattgctgtgctggaaaaagcagcgtacgaagtttgcaaacgtgaggaccgc
ccaacgtcgagcaagccttctgctccgttcattacgtcaacgcttcagcaagcagccagc
actcgtttaggttacggcgttaagaaaacgatgatgttagctcagcgtctgtatgaagcg
ggttacatcacgtatatgcgaaccgactcgacgaatttgagcgcggaagctgtagaaacc
gttcgtggattcattggcgatgagtacggtgacgcttaccttccggctaaacctaatgtg
tatggcagcaaagaaggtgcacaggaagcgcacgaagcaatccgaccttcagatgtggca
gttaaagctgacgatctgaaaggcatggaagcggatgcgcataaactgtattcacttatc
tggaatcagtttgtcgcgtgtcagatgacacctgcaaagtatgattctacgacagtgagc
gtcaaagctgctgagtacacgcttaaggccaaaggccgcattcttaagtttgatggttgg
actcgtgttcaacgtccactaggtaagaatgaagaccagatcctgcctgccgttcaggtt
ggtgacaaggttgatttgattcaattagatcctaaacaacactttaccaaaccgcctgca
cgtttcactgaagcggctttggttaaagagcttgagaagagaggcattggccgtccgtca
acgtatgcgtccatcatctcgacaattcaggatcgtggttacgttaaagttgagcaacgt
cgattctacgccgaaaaaatgggtgaaatcgtaacggatcgcttagatgatagcttccat
gagttgatgaactatgagtttacgtctcgcatggaagaaaagcttgaccaaattgctgaa
ggtgaagcgaactggaagaaggttctggataacttctttggtgactttactggagatctg
gaaaaagcggagcaggacgaagatcatggtggcatgaagccaaaccatatcgtctacact
gatatcgagtgtccaacttgttctcgtgaaatgggtatccgaacagcatcgacaggtgta
ttccttgggtgttcaggttatgcattaccaccaaaagagcgttgtaagaccaccatcaat
ttgggtgacgaagaaggcatcattaacgttttagaagaagacgttgaaacagcagcactt
cgtgctaaaaagcgttgtccgatttgtgaaaccgcaatggacgcttacctgatcgacgat
aagcgtaagctacacgtgtgtggtaacaaccctaattgtgatggttacatcgttgagcat
ggcgagtacaaggtgaaagggtacgatggccctgtcgttgagtgtgacaagtgtggcagt
gacatggttctaaagaacggtcgctttggtaaatacatggattgtactagcgagacatgt
aagaacacgcgtaagatccttaaaaacggcgaagtcgcgccacctaaagaagatcccgtt
catcttcctgagttaccatgtgaaaactcagatgcatactttgtattacgtgatggtgct
tctggcctgttcttggcagcaagtactttccctaaatcgcgtgaaactcgtgcacctctt
gtagaagagttggttcgatttaaagatcgtatttctccgaaattccattatctgacaaca
gcgcctgaaaaagatccagacggtcttcctatggtagtgcgtttcagccgaaaatcgaaa
gagaactatgttcgatctgaggttgatggcaaaccatcaggctacacggcgttgtacatc
gatggtaaatgggaaattacagataagcgtaagaagtccgcaaagtaa
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