Vibrio coralliilyticus OCN014: JV59_39985
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Entry
JV59_39985 CDS
T03497
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
vct
Vibrio coralliilyticus OCN014
Pathway
vct00300
Lysine biosynthesis
vct00470
D-Amino acid metabolism
vct01100
Metabolic pathways
vct01110
Biosynthesis of secondary metabolites
vct01120
Microbial metabolism in diverse environments
vct01230
Biosynthesis of amino acids
Module
vct_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
vct00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
JV59_39985
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
JV59_39985
Enzymes [BR:
vct01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
JV59_39985
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
PT-TG
DUF1955
Motif
Other DBs
NCBI-ProteinID:
AIU68366
UniProt:
A0A1V0IAY4
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All DBs
Position
1:3417011..3418264
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AA seq
417 aa
AA seq
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MDYFNYQDDGQLWAEDVPLTDLAEQFGTPLYVYSRATFERHWNAFDKSVGEHPHLVCYAV
KANSNLGVLNTLARLGSGFDIVSGGELERVIAAGGEASKVVFSGVGKTAPEMKRALELGI
KCFNVESEPELERLNKVAGELGVKAPISLRINPDVDANTHPYISTGLRDNKFGIAFDRAP
AVYQFAQGLENLTIKGIDCHIGSQLTDIEPFIDATDRLLALIDDLKAQGINIEHLDVGGG
LGVIYRDELPPEPSEYAKALLGRLENHQDLELIFEPGRAIAANAGVLLTKVEFLKHTEHK
NFAIIDAAMNDLMRPALYQAWQDIVPVNPREGEPVTYDLVGPICETGDFLGKDRALVLQE
NDLLAVRSAGAYGFVMSSNYNTRTRVAEVMVDGNKAHLVRQREELSSLWALENILPE
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
ttggattacttcaactatcaggatgatggccaactttgggccgaagatgttccactgaca
gacttagcagagcaatttggaacgccactttacgtatattcccgcgcgacgtttgagcgc
cattggaatgctttcgataaatccgttggtgagcacccacacttggtgtgttatgccgta
aaagcgaactcgaatctgggtgtgcttaatacactggctcgccttggatctggctttgac
attgtttctggtggtgaactggagcgtgttattgcagcaggcggtgaagcgagcaaagtc
gttttctcgggtgttggcaaaacggcgcctgaaatgaaacgtgccctagaactgggtatc
aagtgtttcaatgtggaatccgagccagaactagagcgtcttaataaggtcgcgggtgag
ttaggagttaaagcgccaatttcactgcgtatcaatccagacgttgatgccaatacgcac
ccttatatctcaacaggtctgcgtgataacaagtttggcattgcgtttgatcgtgcacct
gcggtgtaccagtttgcacaaggtcttgaaaacttaacgatcaaaggcatcgactgtcac
attggttctcagctgacggacatcgaaccgtttattgatgctactgaccgcttgctggca
ctgattgatgacttaaaagcgcaagggatcaacattgaacaccttgatgtgggtggtggt
ctgggtgttatttaccgtgatgaactgccgccagagccatcggaatatgctaaggcactg
cttggcagactggaaaaccaccaagatctggaactgatttttgaaccaggccgtgcaatt
gctgctaacgcaggcgtattgctgaccaaggttgaattcctaaaacataccgagcacaaa
aacttcgccattatcgatgctgcaatgaatgatctgatgcgccctgctctgtatcaagca
tggcaagacatcgtgccggttaacccacgtgaaggtgagccagtgacatacgatctggtt
ggcccaatttgtgaaacgggcgatttccttggtaaggaccgtgctttggtattgcaggaa
aatgacctgcttgcggttcgctcagctggtgcgtatggttttgtgatgtcgtcgaactac
aatactcgtactcgtgtcgctgaagtgatggtcgatggcaataaagcgcatttggtacgc
cagcgtgaagagctgtcgagcttgtgggccctagaaaacattcttccggagtaa
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