Candidatus Vallotiella adelgis: GJV44_00004
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Entry
GJV44_00004 CDS
T07928
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
vcv
Candidatus Vallotiella adelgis
Brite
KEGG Orthology (KO) [BR:
vcv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vcv03032
]
GJV44_00004 (gyrB)
03400 DNA repair and recombination proteins [BR:
vcv03400
]
GJV44_00004 (gyrB)
Enzymes [BR:
vcv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
GJV44_00004 (gyrB)
DNA replication proteins [BR:
vcv03032
]
Prokaryotic type
DNA Topoisomerases
GJV44_00004 (gyrB)
DNA repair and recombination proteins [BR:
vcv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GJV44_00004 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
UDG81806
LinkDB
All DBs
Position
2924..5407
Genome browser
AA seq
827 aa
AA seq
DB search
MTEQHRQQVSANSDNSYDESSIQILEGLEAVRKRPGMYIGDTSDGTGLHHLVFEVLDNSI
DEALAGYCNDIYVVIHLDNSISVTDNGRGIPTDIKRDDKHEPKRSAAEIVMTELHAGGKF
NQNSYKMSGGLHGVGVSCVNALAKWLRLTVRRSGKKYFLEFRRGVVRDRVLEQRDNEQVS
PMAIIGDTENRGTKVHFLADDTIFSRVEYHYDILAKRMRELSFLNHGVRIRLTDERTGKK
DDFAFSGGVKGFVEYINKTKQILHQNIFHVLGEKDGIGIEVAMQWNDSFNENVLCFTNNI
PQRDGGTHLTGLRAAMTRVVNKYITESEIAKKSKIDTIGDDMREGLSCVLSTKVPEPKFS
SQTKDKLVSSEVRAPVEEIIAKALEDYLLEMPNDAKVICSKIVDAARARDAARKAREMTR
RKGVLDGVGLPGKLADCQEKNPEKSEIYIVEGDSAGGSAKQGRDRKFQAILPLRGKVLNV
EKARYDKLLSSEQIVTLITALGCGIGKDDYNIDKLRYHRIIIMTDADVDGAHIRTLLLTF
FYRQMPEIIERGYIYIAQPPLFKLKVGKEEQYLKDQHELNQHMLQLALHSAELVPSEGAK
PILGSELNKFARLYLFTQEMVDRLSRLYDEASIEAVINGVTIDLTSEDAARQSAQALQNK
LCDSIPKPDVSVLHQYDAVRELHSLRIERWHHGNIKISIIDEEFLLIADLQQLIDAAHTL
KRLIGDGAIIKRGERSRAVTDFKSVMRWLITDAERNLSKQRYKGLGEMNPEQLWETTMDP
ATRCLLRVQIEDTIAADGIFTTLMGDEVEPRRAFIESNALRARNIDV
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgactgaacagcacagacagcaagtgagtgcaaattcggataacagctatgatgagtcg
tcaatccagatcctcgaaggtctcgaggctgtacgcaaacggccaggtatgtatatagga
gatacttctgatggaaccggtctgcaccatctcgtatttgaggtgctagataactcgatt
gatgaagcgcttgctggatactgcaatgatatctatgtagttattcatctggataattcg
atctctgtaacggacaacggccgaggaatcccgactgacatcaagcgcgacgataaacac
gaacccaagagaagcgcggccgaaatcgtgatgaccgaattgcacgctggcggaaagttt
aatcagaacagctataagatgtcaggcgggctgcacggtgttggtgtatcgtgtgtcaat
gcactggccaaatggctccggcttaccgtacgccgcagtggaaaaaagtatttcttagaa
tttcgtcgcggtgtcgtgagggatcgtgttctcgagcaacgcgataatgagcaagtctca
cccatggcgattatcggagacaccgaaaaccgtggcactaaagtgcactttctagccgat
gatacgatatttagcagagtcgaataccactacgatatcctcgccaagcgcatgcgcgag
ttatcgttcctaaatcatggtgtacggattcggctgaccgatgagcgaacaggaaagaaa
gatgattttgcattctcgggtggtgtaaaaggtttcgttgaatacattaataagacaaag
cagatcttgcatcaaaatatctttcatgtccttggcgaaaaagatggaatcggtattgaa
gttgcaatgcagtggaacgatagctttaacgaaaatgtcctgtgtttcacaaataatatt
ccgcagcgagacggtggaacacatttaactggactgcgcgcagcgatgacacgcgtagtt
aataagtatattacagaaagtgaaatcgcgaaaaagtcaaaaatagatacaatcggcgac
gatatgcgagaagggctatcatgcgtacttagtaccaaggtgcccgagcctaagtttagc
tcacagacaaaagacaaactagtatcgtcagaagttcgcgcaccagtcgaggaaattata
gcgaaggcgcttgaagactacctactcgagatgccaaacgacgcgaaggttatctgcagt
aaaattgttgatgctgcacgagcgcgcgacgcggcacgaaaagctcgagagatgacgcgt
cgcaagggtgtgttagatggcgtcgggctacccggaaagttagctgattgccaggaaaaa
aaccctgagaaatcagaaatctacatcgtcgagggtgactcagcaggtggatctgcaaaa
cagggacgagaccgcaagttccaagcaatcctgcctcttcgcggcaaggtactcaacgtc
gagaaggctaggtacgacaagctgctatcgtctgaacagatcgtcacattaattactgcc
ctcggttgtggaatcggaaaagatgactataacatcgataagttgagataccaccgtatt
attataatgaccgatgcggatgtggatggagcgcatatccgaacgttgctattgacgttt
ttctatcggcaaatgcccgaaatcatcgagcgtggatatatttatatcgcacaaccacct
ctattcaagttgaaggtcggaaaagaagagcaatacctaaaagatcaacatgagttgaac
caacatatgctgcagctagcattacatagtgcagagctagtgccatcagaaggtgcgaaa
ccaattcttggtagcgaacttaacaagtttgctcgcttatacttgtttacacaggaaatg
gtggaccgactcagccgcctctatgatgaagcttcgatcgaagcagtcataaacggcgta
actatagacttaacgtccgaggacgcggctcggcaatcggcgcaagccctgcaaaataag
ctgtgcgatagcatacctaagcccgatgtatcagtattacaccaatacgatgctgtacgc
gagttgcattcgctacgcatcgagcgatggcatcacggtaatattaaaatctcgatcatc
gatgaagagtttttattaatcgcggacctccagcagctaatagatgccgcacatacattg
aagaggttaatcggcgacggcgcaattattaagcgcggcgagcggtcaagagctgtaaca
gactttaagagcgtaatgaggtggctaatcacagacgcggaacgcaacttatcgaagcag
cgctacaaggggctcggcgaaatgaatccggaacagctttgggaaaccacgatggacccg
gccacgcgttgtttgctacgggttcagatcgaggatacaatcgctgccgatgggatcttt
accacattaatgggtgacgaagtcgagccaagaagggcatttatcgagagtaatgcactg
cgagcacgaaatattgatgtgtaa
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