Candidatus Vallotia cooleyia: GJV44_00024
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Entry
GJV44_00024 CDS
T07928
Symbol
priA
Name
(GenBank) Primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
vcv
Candidatus Vallotia cooleyia
Pathway
vcv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vcv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GJV44_00024 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcv03400
]
GJV44_00024 (priA)
Enzymes [BR:
vcv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GJV44_00024 (priA)
DNA repair and recombination proteins [BR:
vcv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GJV44_00024 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
PriA_CRR
AAA_30
Motif
Other DBs
NCBI-ProteinID:
UDG81824
LinkDB
All DBs
Position
33324..35615
Genome browser
AA seq
763 aa
AA seq
DB search
MQLMPFRYVRVALDYPLSTLYDYRWTLPLRPMPGMLAQVRFGRQQTVGLVIEVSNTTDVP
QNRLRDIQSVCIECPPLNENWLQLIAFAADYYQRSRGEVALPALPQVLRNAARWPKLFAR
ERVYQLTVAGRSRLPNALPTRALALRRLAKALLRSDSLGVADIRLIYPKAIAKLEQWQKR
GWVHIQWRSTAEAQKINDMPRSSGQSTINILSRLDQYAVPDLNAEQRAAVEAINAARSFV
PFVLHGVTGSGKTEVYLHGLAALFDRHPDAQALVMIPEINLTPQFESVFRARFSHWPSTA
LVTLHSHLADDERARNWLAAHTANARLVIGTRLAVLASLPRLAMIIVDEEHEAAYKQQEG
LRYSARDLAVWRAKQLSIPVVLGSATPSLETWWHTCQQRYTRLALSRRAVADAALPKVQL
INMALEKQAGHHRADGLSISLVKALRERLVRGEQSLVFLNRRGYAPVLACDACGWVIGCQ
RCSAYVVLHKPDQRMRCHHCGGESCIPQACPACGNIDLAPFGQGTQRIEEALSKAVLGAR
VLRMDADSTQHKGSTQALLTEMHAGDVDILVGTQMIAKGHDFQRVTLVGVLNSDTALFSH
DFRAGERLFARLMQVSGRAGRRSALSEVLIQTKYAQHPLYLALARHDYIGFAETALAERR
DAHLPPFIFQALLRAEAYGLNDALQFLNEAASILDKIPGSECVMHYDPVPMNIVKVMHVH
RAQLLLESASRFALQNTLRAWVLQLRKIKRVLRWNVEVDPLDI
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atgcaactgatgccttttcgttacgtccgagtcgcactagactatccactttcgacacta
tacgactatcgctggactctaccgttgcggccaatgcctggtatgctcgcacaagtgcga
tttggtcgtcagcaaacagtaggactcgttattgaagtttctaatactactgacgtgcca
caaaatcgcttacgagacattcaaagcgtgtgcattgaatgtccaccgttaaacgagaac
tggctgcaattgattgcgtttgctgcagattactatcagcgaagccgtggagaagtggcg
ttgccagcattaccacaggtattgcgcaatgctgctcgttggcctaaattattcgcccga
gagcgtgtttatcagctaacggtggccggacgcagtaggttgcctaacgcactaccgact
cgtgcattagcgttacgacgacttgccaaggcactattacggtcagattcgctgggcgtg
gccgatattcgattaatctaccctaaagccattgcgaaactcgagcaatggcagaagcgc
ggatgggtccacatacagtggcgcagcacagccgaggcacagaagataaatgatatgccg
cggtcatccggccaatctacaatcaatatattatcgagactagaccagtatgctgtacct
gatctaaatgccgaacagcgtgcggcggtcgaggcgattaacgcagcacgcagcttcgtg
ccatttgtattacatggtgtaaccggtagcggaaaaactgaggtatatttacacggatta
gccgctttatttgatcggcatcctgatgcgcaggcactggttatgataccggagattaac
ctaacgccgcaatttgaatcggtgttcagagcgcgtttttcgcactggccatctaccgcc
ttggtgactctacatagtcacctggcagatgacgagcgagctcgaaattggctggcagca
catactgctaatgcacgtctagtaataggaacacgcttggcggtgctagcttcgttgccc
cggctggcgatgattatcgtcgatgaagaacatgaggctgcttataagcaacaagaagga
ctgcgctactctgcacgagatctagcggtatggcgtgctaagcagttaagcatccctgtc
gtgcttggctcagctactccgtcgctggaaacatggtggcatacttgccagcaacgctat
acaaggttagcgttatctcggcgagcagtggcagatgcagcgttgcctaaagtccagcta
attaatatggcattggaaaaacaggcgggtcaccatcgtgcagatgggttgtcgatatct
cttgtgaaggctttgcgggagcgtttagtgcgcggtgaacagagcctagtttttctaaac
cgacggggttatgcgccggtgctagcttgcgacgcgtgtggctgggttataggttgccag
cgctgcagcgcatatgtagttttgcacaagcccgatcaacgtatgcgatgtcatcactgt
ggcggggagagttgcatcccgcaggcatgcccggcatgtggcaatatcgacttagcgcca
tttggccaaggtacgcagcgtattgaggaagcgcttagtaaagcggtgcttggtgcgcga
gtgttacgaatggatgcggatagcacgcagcacaagggtagtacacaggctttgttgaca
gaaatgcacgctggtgatgtcgatattctggtcggtacacagatgattgccaagggacat
gactttcaacgggtcacgctagtcggcgttctaaattcagataccgctttattttcgcat
gattttcgcgcgggagagcgactttttgcacggttaatgcaagtttcaggccgagctggg
cgaaggagtgctctaagcgaagtgttgatccagaccaagtatgcgcagcatccattatat
ctagcgttagcgcgccacgattatataggttttgctgaaacagcactcgctgagcgacgc
gacgcacatctacctcccttcatttttcaggctttgctgcgtgctgaggcatatggctta
aatgatgcgctgcagtttctcaatgaagctgcttcgatactcgacaagatacctggatct
gagtgcgtgatgcactatgatccagtgccgatgaacatcgtcaaagtaatgcatgtgcac
cgcgcacagctattgctcgaaagcgcttcgcgatttgcgttacaaaatacgctgcgtgct
tgggtgctgcagttgcgaaaaataaagagagtgctgcgctggaatgtagaagtagatccg
ctagatatctag
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