Candidatus Vallotiella adelgis: GJV44_00137
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Entry
GJV44_00137 CDS
T07928
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
vcv
Candidatus Vallotiella adelgis
Brite
KEGG Orthology (KO) [BR:
vcv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vcv03016
]
GJV44_00137 (truB)
Enzymes [BR:
vcv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
GJV44_00137 (truB)
Transfer RNA biogenesis [BR:
vcv03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GJV44_00137 (truB)
Prokaryotic type
GJV44_00137 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
UDG81922
LinkDB
All DBs
Position
complement(163864..164847)
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AA seq
327 aa
AA seq
DB search
MPEKTDPKSVIFNIKQQRNPAQTRFMRRSIDGVLLLNKSVGLSSNSALIYAKRLLNAKKA
GHTGTLDPLASGLLPLCFGEATKFSQDLLDSDKTYSAILRLGIRTTTNDAEGDVLQVRPV
TCDRAAVDAVLTAFRGLIMQVPPMYSALKRDGKPLYKYARAGYTLNRDARAVTIHALECI
KCTFDVIASMTIRVTCSKGTYIRTLAEDIGEALGCGAHVTMLHRTGVGRLALHDAITLGE
LSHVDESRRLDFLQPIDILLSTLSPVELNAEMARRFMHGQQLRLVSNPHINENIRVKVYD
ADRHRLIGLGRCERGVLFPERVISIPD
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
gtgcccgagaagactgacccaaaaagtgtgatatttaatatcaagcaacaacgcaatcca
gctcagacgcgctttatgcgacgctctatagatggtgttttactacttaataagtctgtt
ggcctatctagcaacagcgcattaatatacgctaagcgcttactcaatgctaaaaaagcc
ggacatactggaacactagatcctcttgcatctggtttattgccgctatgcttcggcgaa
gcaactaagttttcgcaggatctacttgattccgataagacctatagcgcgatactgagg
ctgggtattcgcacaacgaccaatgatgcagaaggtgacgtgctgcaggtgcgacctgtt
acatgtgatcgcgcggcagttgacgcagtgctcactgcgtttcgtggtctcattatgcaa
gtgccgcccatgtattcagcgctaaagcgcgacggcaaaccactttataaatatgcccgc
gcaggctatacgcttaatcgtgacgcccgcgctgttacgattcatgctttagaatgtatc
aagtgcacatttgacgttatagcgtctatgacaatccgagttacgtgtagtaaaggaact
tatattcgcacattagctgaagatattggagaggcgctgggttgcggagcgcatgtaaca
atgctacaccgcaccggtgttggaagattggcgctacacgacgctataacattaggtgaa
ctatcccatgtggacgaatccagacggttagattttttgcaaccaatcgatatattgtta
tcaacgctctcaccagtcgaattaaatgctgagatggctagacgctttatgcatggccag
caattgcggttagtaagcaacccacatataaatgaaaatattagggtcaaggtatatgat
gctgacagacatcggctgattggactcggtcggtgcgagcgtggtgtgctatttccagag
cgcgtgatttctattcccgattag
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