Candidatus Vallotia cooleyia: GJV44_00178
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Entry
GJV44_00178 CDS
T07928
Symbol
rlmN
Name
(GenBank) Dual-specificity RNA methyltransferase RlmN
KO
K06941
23S rRNA (adenine2503-C2)-methyltransferase [EC:
2.1.1.192
]
Organism
vcv
Candidatus Vallotia cooleyia
Brite
KEGG Orthology (KO) [BR:
vcv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vcv03009
]
GJV44_00178 (rlmN)
Enzymes [BR:
vcv01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.192 23S rRNA (adenine2503-C2)-methyltransferase
GJV44_00178 (rlmN)
Ribosome biogenesis [BR:
vcv03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
GJV44_00178 (rlmN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RlmN_N
Radical_SAM
RNase_Zc3h12a
Motif
Other DBs
NCBI-ProteinID:
UDG81959
LinkDB
All DBs
Position
complement(217426..218556)
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AA seq
376 aa
AA seq
DB search
MATTDTVNLLDFDPAALVAYCARLGEKPFRARQLQKCIHYSGINDFNAMTVLAKSLRNKL
KTCAVIRHSAVLQDHESVDGTRKWLLDVGAGNAVETVYIPHQERGTLCLSSQAGCTVNCR
FCSTGRQGFSRNLSVSEIIGQLWMAEFALRATRGGRCPSERVITNVVMMGMGEPLLNFDS
VVPAMRLMLDNNAYALSRRRVTLSTSGVVPMIDRLAAELPVSLAVSLHAPNDALRDELVP
LNRKYPLSELMAACSRYLRVAPRNFITFEYCMLDGINDSDEHARQLLALTRAVPCKFNLI
PFNPFPKSRLLCASPERIKRFAQILIDAGFVTTVRRTRGSDINAACGQLAGEVLNRTRIA
ERERRRYHAGTGLVSI
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccactgatacggtcaatcttctggattttgatcctgcggcacttgtcgcgtat
tgtgcacgtctcggcgagaaaccatttcgcgcccgacagttacaaaagtgcatccattac
agcggtatcaatgattttaacgcgatgaccgttctcgcgaaatcgttacgtaacaaactc
aagacttgtgcagtaatccgtcattccgcagtgctacaagaccacgagtccgtagacggc
acgcgaaaatggctgctcgatgtgggtgcgggcaatgctgtagaaactgtgtatatcccg
catcaagagcgcggcacgctatgtttgtcatcgcaggccggctgtacggtgaactgtcga
ttctgctcgacaggcagacaaggtttttcacgtaatcttagtgttagtgaaattattggc
cagttgtggatggctgaatttgcgctacgagctacgcgcggtggtcgttgtcccagtgaa
cgagtgattacaaatgttgtgatgatgggtatgggcgagccgctgttaaatttcgattca
gtggtacccgctatgcgacttatgctagataacaatgcatacgcattgtcacgtcgccgg
gtgacactgtctacatcgggcgtcgtgccgatgatcgatcgactggcagctgaattgcca
gtatcgctagccgtttcgctacatgcacctaacgacgctttacgcgacgaattagtgccc
ctaaaccgaaagtacccgctttcggaattgatggcggcatgtagtcggtatctgcgcgtt
gcgccgcgcaattttattacattcgagtactgcatgctagacggtatcaatgatagcgat
gaacatgcacggcagctgcttgcactgacgcgtgctgtgccatgtaaatttaatctaata
ccatttaatccatttcctaaatccaggctgttgtgcgctagtccagagcggattaagcgg
tttgcccagattctgatcgatgcaggtttcgtgacaaccgttcgtagaactcgcggcagc
gatatcaatgcggcctgcggacagttagctggcgaggtcttgaaccgtacccgaatagca
gagcgggagcgtaggcggtaccacgcgggcactggtctcgtatccatctag
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