Candidatus Vallotiella adelgis: GJV44_00233
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Entry
GJV44_00233 CDS
T07928
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
vcv
Candidatus Vallotiella adelgis
Pathway
vcv03420
Nucleotide excision repair
vcv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vcv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GJV44_00233 (uvrD)
03430 Mismatch repair
GJV44_00233 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcv03400
]
GJV44_00233 (uvrD)
Enzymes [BR:
vcv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GJV44_00233 (uvrD)
DNA repair and recombination proteins [BR:
vcv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GJV44_00233 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
GJV44_00233 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
Viral_helicase1
AAA_30
PcrA_UvrD_tudor
AAA_11
Motif
Other DBs
NCBI-ProteinID:
UDG82003
LinkDB
All DBs
Position
complement(283757..286288)
Genome browser
AA seq
843 aa
AA seq
DB search
MAIFNYKGASDALVLITSTHAYAIFSIGLYTAAFDERLFDYGHIMAGLFCLKLLMSDFLA
NLNPEQCAAVTLPNEPALILAGAGSGKTRVLITRIAWLISRGKADPSGILAVTFTNKAAH
EMLVRLEAMLPVSTRNLWIGTFHGLCNRMLRSHYGDAGLPQSFQILDAADQLSIIKRLMK
SLKIDDEKYSAKNFQYFINNAKEQNLRSEQVDANDNFHRKCVELYAAYEQQCQREGVVDF
SELQLRCYELLQHNPALRAHYQARFHHILVDEFQDTNKLQYAWLKLLAGQNDTIFAVGDD
DQSIYAFRGANVGNMLDFKREFNVQHLIKLERNYRSHGNILDTANALIAHNSKRLGKNLR
TDAGHGKPVLVYRAMTDSQEASWVVEEIRALIDTGLSLSAIAVLYRSNAQSRIVEHTLIN
AGIPYQIYGGLRFFERQEVKHALAYLRLIINRNDDTAFVRVVNFPARGIGARSLEQLADA
ARLYNCSMVEAIPYIFGKAGQTLGRFLELIELIRSETYVMSLPDMVEAVIRLSGLEKFYA
NERDGQERIDNLLELVNAANAFASEEGYSLDIPAHPIPLAAGSESCVSMLQWSDNNGGRD
LLDESRLDLLAQHSDEMTPLAGFLAHASLEAGDNQLQNSEHSVKLMTVHAAKGLEFSAVF
ITGLEEGLFPHENSMIQRDGLEEERRLMYVAITRAKEQLYLSFAQSRMLHGQTRYNVRSR
FFDELPNAVLKWLSPKREHSPYLGKPGKSVNSSDSTKWRKNWSSRGGGSQKNVHFDDRVP
AFSNQHRTSKSGFWIGQPVFHEKFGEGKITALEGEGENAKAQVIFNRRCTKWLVLAVAKL
RSI
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atggctatatttaattataagggagctagtgatgcgctggtgctgattacttcaacgcat
gcttatgcaattttctctatagggctgtatacagcggcattcgatgaacgcttgtttgac
tacggtcatataatggcaggcttattttgcctcaaactactcatgtctgattttcttgcc
aatctgaatccagagcaatgtgcagcggtgacgctgcccaatgaacccgcgctaattctt
gcgggagcaggtagcggaaagactcgcgtgctcattacccgcattgcatggttaatctcg
cgcggcaaagcagacccatcaggcattctggctgtcacttttacgaataaggcagcgcac
gagatgctggtccgcctcgaggcgatgctgccagttagtacgcgcaacctgtggattggt
acatttcatggattatgcaaccggatgctacgatctcattacggcgatgctgggttacca
cagagctttcagatcttagatgcggcagatcagttgtcaataatcaagcggctgatgaag
agcctgaaaatcgatgacgagaaatattccgcaaagaattttcagtacttcatcaacaac
gcgaaagagcaaaatttgagatctgagcaggttgatgcgaatgacaattttcatcgtaag
tgcgtagagctatatgctgcctacgaacaacagtgccaacgcgagggggttgtcgatttt
tcagaattacagctgcgttgctatgagctgctgcaacacaacccggctctgcgggcacat
tatcaggcccgattccaccatattctagttgacgagttccaggataccaataaattgcaa
tatgcgtggctgaagctgcttgccgggcagaacgacacaatatttgcggttggcgacgac
gaccagtcgatttatgcatttcgtggcgctaacgttggaaacatgctcgactttaagcgc
gaatttaacgtccagcatctcatcaagcttgagcgaaactatcgttcgcacggcaatatt
ctcgataccgctaatgcgctaatcgcacataattctaagcgtcttggcaaaaatctgcgt
accgatgctggtcacggaaaaccggtgttagtctatagggcaatgaccgattcacaagaa
gccagttgggttgtcgaggaaatccgcgctctcattgacacgggcctatcgctcagcgcg
attgcggtgctttatcgaagcaacgctcagtctcgtatagtcgaacatacactaatcaat
gccgggattccatatcagatctatggcggactgcgtttttttgagcgacaagaagtcaag
catgcgcttgcgtacctgcggttgattattaatcgaaatgatgatactgcatttgttcgg
gtagttaatttcccagcccgtggtattggtgcacgctcgcttgagcaactagccgatgct
gctcggctatataactgctcgatggtagaggcaattccttatatattcggtaaggccggc
cagacccttggcaggtttcttgaattgattgagctgatacgtagtgaaacctacgtgatg
agcttgccagatatggttgaggcggtgattcgcttgagtggactagaaaaattctatgct
aatgagcgtgacggccaggaacgcattgataacttgctggaactagtgaacgcggctaac
gcgttcgcctcggaggagggttatagccttgatataccggcgcacccgattccgcttgct
gcgggaagcgaaagctgcgtttcgatgctgcagtggtcggataataacggcgggcgggac
ctactagatgagtcacgacttgatctactagcacagcattctgacgagatgacgccgctg
gccggttttttagcgcatgcctcgctcgaggcgggcgataatcagctacagaatagcgag
cactcggtaaaattgatgacagtgcatgctgctaaggggcttgaattttccgccgtcttt
attactggccttgaagaaggcttgtttccgcatgaaaacagtatgatccagcgggatggg
cttgaggaagagcgtcgcctgatgtacgttgcaatcacacgcgccaaagagcaactttac
ttgtcgtttgcccaaagcagaatgctgcatggtcaaacacgctataacgtgcgttcacgt
ttctttgatgaattaccgaatgcggtattgaagtggctctcgcctaagcgagagcacagt
ccatacctaggaaaaccgggaaaaagcgttaattctagtgactctactaaatggaggaaa
aattggtctagccgcggcggtggtagccagaaaaacgtgcactttgatgaccgtgttccg
gcattttcgaaccagcatcgcacttcgaaaagtggcttttggattggtcaacccgtcttc
cacgaaaaattcggcgagggcaagattactgcattagaaggagagggagaaaacgcgaaa
gcacaagttatatttaatcggcgctgcacgaaatggcttgtactagcagtcgcaaaattg
cggtcaatataa
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