Candidatus Vallotiella adelgis: GJV44_00252
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Entry
GJV44_00252 CDS
T07928
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
vcv
Candidatus Vallotiella adelgis
Pathway
vcv03030
DNA replication
vcv03430
Mismatch repair
vcv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vcv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GJV44_00252 (dnaQ)
03430 Mismatch repair
GJV44_00252 (dnaQ)
03440 Homologous recombination
GJV44_00252 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vcv03032
]
GJV44_00252 (dnaQ)
03400 DNA repair and recombination proteins [BR:
vcv03400
]
GJV44_00252 (dnaQ)
Enzymes [BR:
vcv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GJV44_00252 (dnaQ)
DNA replication proteins [BR:
vcv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GJV44_00252 (dnaQ)
DNA repair and recombination proteins [BR:
vcv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GJV44_00252 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
UDG82021
LinkDB
All DBs
Position
315657..316400
Genome browser
AA seq
247 aa
AA seq
DB search
MRLLVLDTETTGLNAKGGDRIIEIGCVEIINRQLTGNNLHLYINPERDSDPGALAVHGLT
TEFLRDKPKFSKISALLRDFIKDSSIIIHNAPFDISFLDAEFSMLGLPPFRDHCGEVIDT
LLQARAMFPGKRNSLNALCDRFGISNTHRTLHGALLDAKLLADIYLKMTRGQECLAIDIL
ADTPGLASVATERVSLAQFQLPILSANDDELAAHADMLDQLDKTLKKLCVWRETLCLANK
PLPIATV
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcttcttgttctcgatactgaaaccactggtttaaacgctaagggtggagatagg
attattgaaatcggctgtgtcgaaatcatcaaccggcaattgactggtaataatctgcat
ttatacattaatccggagcgagatagcgatcctggcgcattagctgtgcatggattgact
acagaatttctgcgcgacaaaccgaagttctcaaaaatatccgctttgctacgcgatttc
atcaaggattccagcatcattattcataacgcaccgttcgatattagctttctcgacgca
gaattttcgatgctaggattaccaccgtttcgtgatcattgcggtgaagtaatcgatacg
ctgctgcaagctagggcaatgttccctggcaagcgcaactcactgaatgcactatgcgat
cgcttcggcattagcaatacgcatcgtacgctgcatggtgcacttcttgatgcaaaatta
ctagccgatatctacttaaaaatgacgcgaggccaagaatgtttagctattgatatacta
gctgacacgccaggtctggcatcggtagctacagagcgagtgtcgcttgcccaatttcaa
ctacccattctcagtgcaaacgatgatgagctggccgcgcacgctgacatgcttgatcaa
ctcgataaaacactcaaaaagctttgcgtatggagggagacactatgtctagcgaataaa
cctctacccatagcgactgtatga
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