Candidatus Vallotiella adelgis: GJV44_00285
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Entry
GJV44_00285 CDS
T07928
Symbol
rluC
Name
(GenBank) Ribosomal large subunit pseudouridine synthase C
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
vcv
Candidatus Vallotiella adelgis
Brite
KEGG Orthology (KO) [BR:
vcv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
vcv03009
]
GJV44_00285 (rluC)
Enzymes [BR:
vcv01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
GJV44_00285 (rluC)
Ribosome biogenesis [BR:
vcv03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
GJV44_00285 (rluC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
UDG82050
LinkDB
All DBs
Position
complement(353944..354948)
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AA seq
334 aa
AA seq
DB search
MNGLGKISRNHVAADHVSWINVDDALAGQRIDNFLLRLCKGVPKSHIYRIFRSGEVRVNK
GRVKASYRLKHGDIVRVPPIRVAQLDSSRIRAPATKFTVLYEDDCLIVLDKPAGIAVHGG
SGVSFGIIEQMRAMRPDAAMLELVHRLDRETSGVLLLAKKRAALINLHQQIREGRLDKRY
LVCAHGEWLADWGARHVVKEPLYKYRTTNGERRVRVQFDGQASHTVFNLRRHLGNYLLLE
AELKTGRTHQIRVHLAHLGLPIVGDDKYGNFLLNKDCARPDARPSLRRMFLHAWRLRIQH
PVSGIPITFSAPLPVACSNFLQQLLTNMFDLDDT
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgaatgggttaggcaaaatatcacgtaatcatgtggctgctgaccacgtttcgtggata
aacgtggacgacgcattagctggccagcgaatcgataatttccttcttcgcttatgcaaa
ggagtaccaaaaagtcatatttatcggatttttcgaagcggtgaagtacgagttaataaa
ggccgagttaaggcttcgtaccggcttaagcatggtgatatcgtgcgtgttccacctata
cgggtggcacagcttgatagttcccggataagagcaccggccacgaagtttacggtactg
tatgaggacgactgcttgattgtgctggacaaaccagctggtattgcggtacacggaggc
agcggggtaagttttggcatcattgagcaaatgcgtgctatgcgtcctgatgctgctatg
ttggaactagtccaccggcttgaccgggaaacatctggtgtattgttgctagcgaagaag
cgcgcagcgcttattaatctgcaccagcagatccgtgagggtcgcttagataagcgttac
ttagtgtgtgcgcatggagagtggctcgcagactggggcgcgcgccacgtagtaaaggaa
ccgctatataagtatcgtaccactaacggtgagcggcgagttcgcgtgcagttcgatgga
caggcttcgcatacagtttttaatctacgacgtcaccttggtaactatctattgctagag
gcagaactaaaaacaggtagaactcatcagatccgcgttcatctagcgcatctaggattg
ccaatcgtcggtgacgataagtatggcaattttctgttaaacaaagactgtgcccgtccc
gatgctcggcctagcttgcgccggatgttcttgcatgcgtggcggttgcgtattcaacac
ccggttagcggtattccgataacattttcggcgccgttgcccgtcgcatgcagtaatttt
ttacaacaattattaacgaacatgttcgacttggatgacacataa
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