Candidatus Vallotia cooleyia: GJV44_00474
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Entry
GJV44_00474 CDS
T07928
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoylalanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
vcv
Candidatus Vallotia cooleyia
Pathway
vcv00470
D-Amino acid metabolism
vcv00550
Peptidoglycan biosynthesis
vcv01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
vcv00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GJV44_00474 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GJV44_00474 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vcv01011
]
GJV44_00474 (murD)
Enzymes [BR:
vcv01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
GJV44_00474 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
vcv01011
]
Precursor biosynthesis
Amino acid ligase
GJV44_00474 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
Motif
Other DBs
NCBI-ProteinID:
UDG82225
LinkDB
All DBs
Position
complement(611562..613079)
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AA seq
505 aa
AA seq
DB search
MFGERFREHQRLRILVLGIGESGLAMARWCARHGCRLLVADTRVAPPNLSKLAVLGIDVP
FISGEFGPELLDDGIELVAISPGLSPHSANLAALMSVAHERGIEVWGELEFFAQALRVLA
NDGYRPKVLAISGTNGKTTTTVLTGLLCEQAGKSVAVAGNISPSMLNKLSDVIDLEKLPD
VWVLELSSFQLEMSYTFEPDAAVILNITQDHLDWHGGLDSYATAKARIFGPHSLRILNRG
DARVMAFLPPDGANVAYQLFGLDFPQNNGDYGIQRDRGITWIVQAYNCKGTSEQRAIHCC
HKSSRLPFDITVKRLFPVNAMRIRGLHNAANAMAALALAQSISLPLEELLHGLREYRGER
HRVEWIGSIDGVDYINDSKSTNVDATVAALDGLAQRIVLIAGGDGKSQNFAPLIAPVSRW
CRAVMLIGRDAPVLRTALSDVSVKLTLHPSLQAATRAAAAIAQPGDAVLLSPACASLDMF
SGYIQRAQVFLSEVKNIAADKGALL
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgttcggtgagagattccgagagcaccaacgcctaagaatcctcgtattagggatcggc
gaatcggggttagcgatggcccgctggtgtgcgcgccacggttgccgattgcttgtggct
gatactcgagtcgcgccaccgaatctgtcgaaattagcagttctaggcatcgatgttcca
ttcatcagtggcgagttcggtcccgagttgctagatgatggtattgagttagtggctatt
agccctggtttatcgccgcatagcgctaatctagctgccttaatgagtgtagcgcacgag
cgtggtattgaggtatggggtgaattagagttttttgcgcaagcattgcgcgtattagcc
aacgacggctaccggcctaaggtgctagcgatatccgggacaaacggaaagacgacgacc
acggtattaaccggcctgctgtgcgagcaggctggcaagagcgtcgcggtagctggcaat
attagtccatctatgctaaataagctgtcagatgttattgacttagagaaattgccggac
gtctgggtactagagctctccagctttcaactcgagatgtcttatacgtttgaacccgat
gcagcagtcattttaaacatcacacaggatcatcttgactggcatggcggactagattcc
tacgctactgcaaaggcccgaattttcgggcctcactcgttacgtatattgaatcgcgga
gatgctcgcgtgatggcattcttgccgcctgacggtgctaatgtagcatatcagctcttt
ggactcgactttccacagaataatggtgactacggtattcaacgcgacagaggcattacc
tggattgtccaggcgtataattgtaagggtacatcagaacaacgcgcgatacattgctgc
cacaagagcagcagactgccatttgatattacggttaagagactctttcctgttaatgcc
atgcgaattcgcggcttgcataatgcagcaaatgcaatggccgcacttgccttagcccag
tcgatcagtctgccgctcgaggagttactacacggtttacgtgagtaccgtggcgagcgg
catcgtgttgagtggattggatcgattgatggggtagattacatcaatgatagcaaaagc
actaatgtcgatgcaactgtagcggcgctcgatggccttgcacaacggatcgtattaatt
gcaggcggtgacggtaaatctcaaaattttgcaccgcttatagcaccagtatctcgctgg
tgccgagccgtaatgctcattggccgcgatgcgcctgtgcttcgcacagcgctatctgat
gttagtgtcaagctaaccttacatccaagcctgcaggctgcaacgcgtgccgcagcagct
atcgcccagcctggggatgcggtgctgctgtctccagcgtgcgcgagcttagatatgttt
tccggatatatacagcgtgcgcaggtattcctcagcgaagtcaagaatattgcggccgac
aaaggagcgttgctatga
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