Candidatus Vallotiella adelgis: GJV44_00565
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Entry
GJV44_00565 CDS
T07928
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosylase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
vcv
Candidatus Vallotiella adelgis
Pathway
vcv03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
vcv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GJV44_00565 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcv03400
]
GJV44_00565 (alkA)
Enzymes [BR:
vcv01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
GJV44_00565 (alkA)
DNA repair and recombination proteins [BR:
vcv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
GJV44_00565 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
UDG82304
LinkDB
All DBs
Position
complement(736247..737197)
Genome browser
AA seq
316 aa
AA seq
DB search
MATRVVRRSSVNMSPQLEDKMLAANQAVRGTEEKTLPDAVKSDVTHARTSRCATVLNDIA
SRQVTRVIPNEESSCNNMRSLVLAADLARQSTAMTTSALISAESQERKNATSRPDYWDQA
CSDLVHRDRILRKLIPQFGPVHLISHGDPFITLARAIIGQQISVIAAQTIWARLKAACPL
ISPSCIMQLGWTRLIECGLSKRKSGYILELAQHFTSDALYISSWALMDDEAVVDELTQIR
GIGFWTAEMFLIFNLMRPNVLPLDDIGLIRSISLNYFSGEPVTRSEAREVAANWEPWRTV
ATWYMWRSLESLSKQA
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgcgtgtagtaaggcgaagtagcgtcaatatgagtccgcagttagaggacaag
atgttagcggctaaccaagcagtgcgcggtactgaggaaaagacactgccggatgcagta
aagtccgacgttactcatgcgcgtacatcgcgctgcgcaactgtgctgaatgatatcgca
tcacgtcaagttactcgtgtgatcccaaacgaagagtcaagttgcaacaatatgcgttcg
ctagtgttagccgccgacttagctcgtcaatcaaccgctatgacaaccagcgcgttgatt
tcagctgaatcgcaagaaaggaagaacgccacatctcgacctgactattgggatcaggcg
tgttcagacctagtacatcgcgatcgcatactaagaaagttgatcccgcagttcggccct
gttcatttgatatcgcatggtgatccgtttataacacttgcccgcgctattattgggcag
caaatatcggttatcgctgcccagacgatatgggcacgactgaaggccgcttgtccattg
atttcaccatcctgcattatgcagcttggatggacccgattgattgagtgcggactgtct
aaaagaaagtcggggtacattctcgagctcgcgcagcattttacgtctgatgcactgtat
atttcatcatgggcattaatggatgacgaagcagttgttgacgagcttacgcagatacgt
gggattggcttctggactgctgagatgttcttaatttttaatctgatgcgcccaaacgta
ctgccgctggatgatatcgggctcatccgttcgattagtctcaactattttagcggcgaa
ccggttacgcgcagcgaagctagagaggttgccgcgaattgggagccgtggcgtactgtt
gcaacgtggtatatgtggcgcagtttagagtcgctaagcaaacaagcttaa
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