Candidatus Vallotiella adelgis: GJV44_00663
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Entry
GJV44_00663 CDS
T07928
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
vcv
Candidatus Vallotiella adelgis
Pathway
vcv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vcv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GJV44_00663 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcv03019
]
GJV44_00663 (pnp)
03016 Transfer RNA biogenesis [BR:
vcv03016
]
GJV44_00663 (pnp)
Enzymes [BR:
vcv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
GJV44_00663 (pnp)
Messenger RNA biogenesis [BR:
vcv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
GJV44_00663 (pnp)
Transfer RNA biogenesis [BR:
vcv03016
]
Prokaryotic type
tRNA degradation factors
GJV44_00663 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
DUF5813
OB_RRP5_4th
DASH_Dad2
KH_2
S1_2
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
UDG82392
LinkDB
All DBs
Position
complement(849333..851483)
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AA seq
716 aa
AA seq
DB search
MFNKVVKEFKWGQHKVRLETGEIARQASGAVIVDVEDTVVLATVVAAKSARAGQDFIALT
VDYVEKAYAAGKIPGGFFRREGRPSENEIVVSRLIDRPLRPLFPESFYNDVQVVIHVLSI
NPEIPADIPSMIGASAALTISGIPFNGPIGASRIAYIDNQFVLNPTRSQSQSSKLDLVVA
GTERAVLMVEAEAHQLSEEVMLDAVMFGHKQMQVAIDAIHNLVKEGGKPQWDWRPAPKDE
ALIARVTGLALTELQTAYRMQQKQQRSTKLREVYTLVSTKIAEQNMAAGTAIVNTMLIDK
ILCDLEAKIVRSQILNGEPRIDGRDTCTVRPIEIRTGVLPRAHGSALFTRGETQALVVVT
LGTRGDEQIVDAIEGEYRDRFMLHYNMPPFATGETGRISSPKRREIGHGRLAKRALVACL
PDDDEFGYTIRVVSEITESNGSSSMASVCGGCLALMDAGVPMKAHVAGIAMGLILDGNKF
AVLTDILGDEDHLGDMDFKVTGTTQGITALQLDIKIQGVTKEIMWVALMQAKQGRLHILD
KITLAVPSISTQLSQFAPRIITMKINPEKIRDVIGKGGSVIRVLTEETKTTIDISDNGVI
TIASTSSEGMAEAKMRIESITAEVEVGQIYEGEILKLLDFGAIVNILPGRDGLLHISEIA
NERIKDINNYLKEGQQIKVKVIQTDEKGRVRLSMKALLNEISATSLVTPVIPQVEH
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgtttaataaggtcgttaaagaatttaagtggggccagcataaagtgcggcttgaaacg
ggagagatcgcccgtcaggcaagtggtgcagtcattgtcgatgttgaggacactgtcgtg
ctcgcaacagtggtagcggcgaaatccgccagggcagggcaagattttatcgcgctgact
gtcgactatgtggaaaaggcatatgcagccggtaaaattcctggtggcttcttccgtcga
gagggtcgtccttccgagaatgagatagtagtctcacggctgatcgaccgcccattgcgt
ccgctgtttccggagagcttctacaacgacgtacaagtagtaatccatgtactatcaatc
aacccagagattccagcagatattccatcgatgattggcgcttcagcagcgttaactatc
tctggtattccgtttaatgggccaattggcgcatctcgtatcgcctatatcgacaatcag
ttcgtgcttaatccaacgcgctcgcagtctcagtcgtcaaagttagacttggtagttgcc
ggtaccgagcgtgcagtattaatggtcgaagcagaagctcaccagttgtcggaggaggtg
atgcttgacgcagttatgtttggtcataagcagatgcaagtagcgatcgacgccatccac
aatcttgttaaagaaggtggcaagcctcaatgggattggcggccagcaccgaaagatgag
gcattgattgcgcgtgtgacggggttagcgcttactgagttacagacggcataccgaatg
cagcagaaacagcaacgttcgacaaagctgagggaggtatacacgttagtttcgaccaag
attgccgagcaaaatatggcagctgggacagccatcgttaatactatgctgatcgataaa
atcttatgcgatctcgaggcgaagattgtacgtagtcagatattaaacggtgagccgcgt
attgatgggcgtgacacatgcactgtgcgtccgatcgaaatccgaactggagtactaccg
cgcgcgcacggctcagcgctgtttactcgaggcgagacacaagctctagtagtggtcacg
ctcggtacgagaggtgatgagcagattgtcgatgcgatcgagggcgaatatcgcgatcgc
ttcatgctgcactacaatatgccaccgttcgcgactggtgaaactggccgcattagctcg
ccaaagcgacgcgagattggtcacggccgtcttgctaaacgtgcacttgtcgcgtgccta
ccagatgatgatgagttcggctatacaatccgtgtcgtctctgagattactgagtcaaat
ggctcatcgtcaatggcgtccgtatgcggtggctgtttagcactgatggacgcgggtgta
cctatgaaagcccacgtagcaggcatcgctatgggattaatccttgatggcaataagttc
gcggttctaactgatatcttgggagacgaagaccacctaggtgatatggactttaaggtg
acaggcaccacacagggtataactgcacttcagctagatattaagatccagggtgtcaca
aaggaaattatgtgggttgctcttatgcaggcaaagcaaggccgactgcatatcctggac
aagataaccttagcagtgccatcgataagtacacagctgtcgcagttcgcacctcggata
atcacaatgaaaattaatccggaaaaaattcgtgatgtaatcggaaagggtggttcagta
attcgggtgttaacagaagaaactaagacaacaatcgatatctctgataatggtgttata
actattgccagcacaagttctgagggcatggccgaggcgaagatgcgtattgagagcatt
acagcagaagtagaggtcggtcagatctatgagggtgagatcctaaagcttctagatttc
ggcgcaattgtaaatatactgccggggcgcgacggtctattacatatttccgagattgcg
aatgagcggattaaggatattaacaactatctcaaggaaggtcagcagataaaggttaaa
gtcatccaaaccgatgagaaaggtcgggtccgattatctatgaaggcactacttaacgag
atttcggctacatcgcttgtaacgcccgtgataccacaagtagagcattaa
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