Candidatus Vallotiella adelgis: GJV44_00878
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Entry
GJV44_00878 CDS
T07928
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
vcv
Candidatus Vallotiella adelgis
Pathway
vcv00300
Lysine biosynthesis
vcv00470
D-Amino acid metabolism
vcv01100
Metabolic pathways
vcv01110
Biosynthesis of secondary metabolites
vcv01120
Microbial metabolism in diverse environments
vcv01230
Biosynthesis of amino acids
Module
vcv_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
vcv00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GJV44_00878 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GJV44_00878 (dapF)
Enzymes [BR:
vcv01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
GJV44_00878 (dapF)
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Paralog
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
Motif
Other DBs
NCBI-ProteinID:
UDG82582
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All DBs
Position
1129867..1130745
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AA seq
292 aa
AA seq
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MKLTFTKMHGAGNDFVVLDGVRNMILPTPALVRYLADRHFGVGADQLLLVERPTLNGADF
KYRIFNCDGGEVEHCGNGARCFMKFVLNTGLSRAHTICVQVQRGLIMLSVQDNGEVLVNM
GAPAFTTSQTLFDVSGLKPEYDGGDILWPLNINGSTQWISVISMGNPHAVQIVDDTNTAP
VLRDGPLIESHKYFPNRINAGFMQILSRHEIKLRVYERGAGETLACGSGACAAVVAGIRR
GVLDSPVYVRARGGTLTISWNGRCDSKNPVMMAGPATTVFEGEIDVPDELPA
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcacatttactaaaatgcatggcgccggtaatgatttcgtggttcttgacggc
gtgcgaaacatgatcttgcccacaccggcgttggtgcgctatctcgccgaccgccacttc
ggcgtcggtgcggaccagttattgctggttgagcgtcctacgcttaatggggctgatttc
aagtatcgaatcttcaactgcgatggtggagaagtcgaacactgcggaaatggcgcacgc
tgctttatgaagtttgtacttaataccggcctaagtcgagcacacacgatttgcgtgcaa
gtacagcgcggcctaattatgttaagcgttcaggataatggtgaagtacttgttaatatg
ggtgcaccagcattcactacgtcacagacgctgtttgatgtatcgggactaaagccagaa
tacgatggtggggatatactgtggccactcaatataaatggctcaacacaatggatctct
gtcatctcgatgggaaatcctcatgccgtgcaaatcgtcgatgacactaacaccgcaccg
gtactcagagatggtccactcatcgagtcacataagtactttccaaatcgtataaacgca
ggattcatgcagattctctcaaggcacgagataaaattgcgtgtctatgagcgtggcgca
ggcgaaacgctcgcatgcggctcaggtgcttgcgcggcagttgtagccggcatccgtcga
ggggtgctagattctccggtgtatgtgcgagcacgtggcggcacgttaactatctcttgg
aacggcagatgtgacagtaagaatccggtaatgatggccggcccggcaaccactgtgttc
gaaggtgaaattgatgtgcccgacgagttacctgcgtga
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