Candidatus Vallotiella adelgis: GJV44_00897
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Entry
GJV44_00897 CDS
T07928
Symbol
mrdA
Name
(GenBank) Peptidoglycan D,D-transpeptidase MrdA
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
vcv
Candidatus Vallotiella adelgis
Pathway
vcv00550
Peptidoglycan biosynthesis
vcv01100
Metabolic pathways
vcv01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
vcv00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GJV44_00897 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GJV44_00897 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vcv01011
]
GJV44_00897 (mrdA)
Enzymes [BR:
vcv01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
GJV44_00897 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
vcv01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
GJV44_00897 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
DapB_C
Motif
Other DBs
NCBI-ProteinID:
UDG82598
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All DBs
Position
1148065..1150050
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AA seq
661 aa
AA seq
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MIRDQFDRFNQAPLKMTEFNNPRQALINFKLRVAAARVFVLACFMMISCRFLYLQIWNYH
KYSLQSDENRISIAPVVPNRGMIIDRNGVVLARNYSAYTLEIMPSAIHGALDPLIDRLSS
VVSINSRDRRRFKRRYADSKNFESLQIRTRLTDNEVARFTAQRYLFPGVEVRTHLFRQYP
LGTTAAHVIGYIGRISQRDQDRIDAVSEKNDRDPEHYDPRLDANNYSGTDYIGKIGVEQS
YETELHGVTNFEEVEVTAGGRPVRTLSHSRGRCGNNLQLSLDIDMQKSAEQAFSGKRGAL
VAIEPSTGDVLMFVSSPSFDPNLFVEGIDQLTWNELSTSLDRPLINRPLRSTYPPGSTYK
PFMALSALATHKRTPNWSFQDPGSYTFGGHTFHNDVPQGQGWIDMYRSIVVSNDTYYYML
AHDLGVNTIANFMKQWGFGQQTGIDVEGEARGVLPSTDWKKRVYHQPEQQRWYEGETISL
GIGQGYNSYTMLQLAHAVATLANNGVIMKPHLVKAVVNPSTHEFRLTAPKPIGYIQGITQ
ADIDVIKHAMKSVMDTPSGTAYQIFSNASYTSAGKTGTAQVFSLQGQKYPTHALAEHLRD
HALFIAFAPVDHPKIALALIVENGGWGARAGGPIVRRVLDHYLINRVQSNAETTPSKCEH
R
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgatacgcgatcaatttgatcgctttaaccaagcccctttaaagatgacggagtttaat
aatcctcgacaggcactgataaacttcaaacttcgcgtagccgccgctcgcgtgttcgta
ctcgcatgcttcatgatgattagctgtcggtttctatacttacagatttggaattatcat
aaatattcactgcaatctgatgaaaaccgcatctcgattgcgccagtcgtaccaaatcgc
ggaatgattatcgaccgtaatggtgtggtacttgcgaggaactactcggcctacacttta
gagattatgccatcggcaatccatggagcattagatccactcatcgatcggctatcgagt
gtagtcagtattaattcgcgcgatcgccgacgctttaaaagacggtatgcagattcgaaa
aactttgagagtctacaaattcgcacgcgactgaccgacaatgaggtggctcgcttcacc
gctcagcgctacctatttccgggagtagaggtgcgtacacacctgttccggcaataccct
cttggtacaactgcggcacatgtaattggctatatcggtcgcatttcacaacgtgaccaa
gatcgtatcgatgcggtcagcgagaaaaatgaccgcgacccagaacactatgatcctcgg
cttgatgcgaacaactacagtgggaccgactatattggcaaaattggcgttgagcagagc
tacgaaactgagttgcatggcgtaactaacttcgaagaggtcgaggtaactgctggcggc
cgtccggtacgcactctgtcacattcccggggaagatgtggcaacaatttgcagctatca
ctcgatattgacatgcaaaaaagcgcggaacaggcattttcaggaaagcgcggtgcactg
gttgctatcgaaccgtcaaccggtgacgtgcttatgttcgtatcgtcacctagctttgat
ccaaacctattcgttgaaggcattgatcaactaacatggaacgagctcagcacatcactc
gaccgaccgctgataaaccgacccctacgcagtacctatccgccgggctcgacatacaag
ccattcatggcgctatctgctcttgccacgcataagcggacaccgaactggagctttcag
gatccaggctcgtacacattcggtggccacacattccataatgacgtgccacaggggcag
ggatggatcgatatgtaccgttcgatcgttgtatctaacgatacttattactacatgctt
gcacatgatcttggcgtcaatacgattgcaaattttatgaagcaatggggatttggtcag
caaaccggtattgatgtcgaaggtgaggcacgcggcgtactgccatctaccgactggaaa
aaacgtgtttatcatcagcctgagcaacagcgctggtatgagggcgagacgatcagtctc
ggcatcggccagggctacaattcatatacaatgctgcaacttgcgcacgctgtcgcgacg
ctggcgaataacggtgtaattatgaaaccacacttagtgaaggctgttgtaaaccccagc
acacacgaattccggctgacggctcccaaacctattggctatattcagggtattacgcaa
gcggatatcgacgtcatcaagcatgcaatgaaaagcgtaatggataccccttcaggaact
gcctaccaaatatttagtaacgcatcctacacgtcagccggcaaaactggtacagcccag
gtattttctcttcagggccagaaataccctacgcatgcgctagccgagcacctgcgtgat
catgcgctgttcatcgctttcgcgccagtcgatcacccgaagattgcacttgcattgatc
gtcgagaatggcggctggggagcccgcgcaggcggcccgattgttcgcagagtgctggat
cattacttaatcaaccgcgtccagtccaatgctgaaactaccccttcgaaatgcgagcat
cgctga
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