Candidatus Vallotiella adelgis: GJV44_p00003
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Entry
GJV44_p00003 CDS
T07928
Name
(GenBank) AAA family ATPase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
vcv
Candidatus Vallotiella adelgis
Pathway
vcv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vcv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GJV44_p00003
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcv03400
]
GJV44_p00003
Enzymes [BR:
vcv01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
GJV44_p00003
DNA repair and recombination proteins [BR:
vcv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GJV44_p00003
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
UvrD-helicase
Helicase_RecD
SH3_13
SLFN-g3_helicase
DEAD
Flavi_DEAD
RecD_N
T2SSE
AAA_22
UvrD_C
CbiA
NPHP3_N
MukB
Motif
Other DBs
NCBI-ProteinID:
UDG82618
LinkDB
All DBs
Position
unnamed:5352..7370
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AA seq
672 aa
AA seq
DB search
MTDIFLSKGFSRRIKMLAESLGSADDDAQIASAAAEMVSLATANGHVYVKLMALAQHLGH
SADRVRASLLASGVVMCINDNELAPSLPLVIDSNNRLYLARYYEFERGLANALAALAQTQ
FDHVESDDSKRWYNILSRYFGEAGCHNLDWQRVAAAVALSGQLTIVSGGPGTGKTTTVIG
ILSCLIETNQDLRIALAAPTGKAAQHMLEALSSRKSQLACNIAAKMPTESYTLHRLLGSA
PDRGFRYHHRNPLPYDVIVVDEASMIDIALASWLVDAISPSARLILLGDKDQLAAVEAGS
VFAELSAYPCYIGHRGKSIAQALGCTAHALRNAFSAHANGVEYRTTCDTHNISPDRKKIS
CVFDDGNSEISTVELVQNNKAYVANSVQTTTLANCVVWLKTNYRFSLDSPIGALSSAIRD
GLSTDALSILDIKNDRAPTYFIEDSGRVLGHAAREYIASGFSCYTNLLAEVLRNRELPVD
LLFDALNKFRVLCAVRAGPYGTNFFNDWISAKLRRVIRFPINATTQWFSGRSIIVTRNNY
ELGLFNGDIGIAIPALDGVLRVVFKRGDGQLQSVFPAMLPPHDTAFALTVHKSQGSEFER
AVLVLPATFSRALSRELIYTAVTRARSQITIIGTRAVLEQAIRTPTDRDTGLSLRLRYAV
ERAQQSETAPPL
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atgactgacatttttctgtccaaaggattttctcgtcgcattaaaatgcttgctgaaagc
ttaggatctgctgacgatgatgctcaaattgcttcagctgccgccgaaatggttagtttg
gcaactgcgaacggacatgtctacgtcaaactgatggcgcttgcgcagcatctcgggcac
tcggcagatagagttcgcgcatcactgctcgcaagcggagttgtcatgtgcatcaatgat
aatgagctagcacctagtttaccattagtgattgatagcaataaccgactatatcttgcg
cgctattacgaattcgaacgcggactcgctaatgcattggctgcactcgcgcaaacgcag
ttcgaccatgtcgaatccgatgattcgaagaggtggtataacatactatctcgttatttc
ggcgaggctggctgtcacaatcttgactggcagcgcgtcgcggcggctgttgctttgtct
gggcagctaacgattgttagcggtgggccgggtacaggtaaaaccactacagtcataggt
atattatcctgtttgattgaaaccaatcaagatttacgtattgcgctagcagcgccaact
ggaaaggcagcacagcatatgctagaggcattatcttcccgcaaaagccagttagcttgc
aatatagcggccaagatgccaaccgaatcgtatacgttgcaccggttgcttggaagcgcg
ccggatagaggatttcgttaccatcatcgcaatcctttgccgtacgatgtcatcgtagtc
gacgaagcttcgatgatcgatattgcgctagccagttggttggtggatgcgatttcgccg
agcgctcggttgattctgctaggagacaaagatcagttggccgcagtcgaagcaggatcg
gtattcgccgaactgagtgcatatccatgctatattggacatcgcggaaaaagcatcgct
caggcgcttggctgtacagctcacgcattacgcaatgctttttccgcgcacgcaaatggg
gtggagtatcgcacaacatgcgatactcataatatatcgcctgatagaaaaaaaatatcg
tgtgtattcgacgacggaaattcggaaattagtaccgtcgaattagtacaaaataacaaa
gcgtatgtggctaatagtgtacagactaccacgctagctaattgtgttgtgtggttaaaa
actaactatcggtttagtctagactctccaattggagcactttctagtgcaattcgcgat
ggtttgtctacagatgcgcttagcatcctcgatataaaaaatgatcgcgcaccaacatat
tttatcgaggacagtgggcgtgtactcggacacgcggcacgcgaatatattgctagtggt
ttctcatgctatacaaatcttctagccgaggtactacgaaaccgagagctgccggtcgat
ttgttattcgatgcgctcaataaatttcgtgtgctttgtgcggttcgcgccggtccatac
ggcaccaatttttttaacgattggattagcgctaaactacgtcgggttattcgatttccg
attaatgctactactcagtggttttctgggcgctcaattatcgttacgcgcaataactat
gaactcggcttattcaatggcgatatcggcatcgctataccagctctcgacggcgtgctt
cgggtagtttttaaacgaggcgatggacagctccagagcgtttttcccgcaatgttgccg
ccgcatgatacggcattcgcacttactgtccacaaatcacagggttcagaattcgagcga
gctgtactggttttgccagctacgttcagccgtgctttatctcgagaattaatttataca
gccgtaactcgtgcgaggtctcaaatcactattatcggcacgcgtgcagtgcttgaacag
gctattagaacaccaaccgatcgagatactgggctgtcgttgcgattgcggtatgcagta
gaacgtgcacaacagagcgaaactgctccaccactgtag
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