Venatoribacter cucullus: GJQ55_01730
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Entry
GJQ55_01730 CDS
T07641
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
vcw
Venatoribacter cucullus
Pathway
vcw03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
vcw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GJQ55_01730 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcw03400
]
GJQ55_01730 (uvrA)
DNA repair and recombination proteins [BR:
vcw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GJQ55_01730 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GJQ55_01730 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
BCA_ABC_TP_C
AAA_16
AAA_23
nSTAND1
RsgA_GTPase
AAA_22
AAA_21
AAA_25
nSTAND3
NACHT
DnaJ_CXXCXGXG
NTPase_1
Viral_helicase1
cobW
Motif
Other DBs
NCBI-ProteinID:
QQD23271
UniProt:
A0A9X7UWD5
LinkDB
All DBs
Position
342129..344999
Genome browser
AA seq
956 aa
AA seq
DB search
MDKIQVRGARTHNLKNIDLDIPRDKLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSTY
ARQFLSMMEKPDVDLIEGLSPAISIEQKSTSHNPRSTVGTVTEIYDYLRLLFARVGTPRC
PEHDVTLEAQTVSQMVDAIMDLPEDGKFMILAPVVRDRKGEHLHIFESLRAQGFIRVRVN
GLVCDLDDTPELDKRKKHSIEVVVDRFKIKEGIEQRLSESLETCLELSGGIALVASMDDA
AAAPLLFSSQFSCPHCGYSLQELEPRLFSFNNPAGACSGCDGLGVKQYFDPDLVVQDASL
SIAEGAIRGWDRRSIYYYQMLTSVADHYGFDIDKPFAKLSARQRELLLYGSGDDAVNFSY
INSRGDSIVKSHPFEGVLPNLERRYRETDSQMVLEELAKYLSVQPCPACEGSRLRTEARH
VFIGDKNIHGCTTMPVEQALDYFNQLHLAGHRGEIAEKILKEIRERLRFLVNVGLEYLSL
SRSSDTLSGGEAQRIRLASQIGAGLVGVMYILDEPSIGLHQRDNDRLLKTLFHLRDLGNT
VLVVEHDEDAIRSADHLIDIGPGAGVHGGQVIAQGTPEQVFANPNSITGQFMSGKRRIEI
PAQRVPFNKDKVLTLKGARGNNLNNVDLTIPLGLMTCVTGVSGSGKSTLINRTLFPLAST
ALNGATTLKAAEHDSIVGLKQLDKVVDIDQSPIGRTPRSNPATYTGIFTPVRDLFAGTQE
ARARGYKAGRFSFNVRGGRCEACQGDGVIKVEMHFLADIYVPCDVCKGKRYNRETLDIRY
KGKNIHEVLEMTVEDARTFFDAIPAVARKLQTLMDVGLSYIRLGQAATTLSGGEAQRVKL
SKELSKRDTGQTLYILDEPTTGLHFHDIQQLLDVLHRLRDHGNTVVIIEHNLDVIKTADW
LVDMGPEGGSKGGFIIAEGTPEQVADNPASHTGRFLKTMLAAAPVAATTGKKKTKR
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atggacaagattcaggtacgcggggcgcgcacccacaaccttaagaacatcgatctggat
attccccgcgacaagctggtggtgatcactggtttaagcggttccggcaaatcttcgctg
gcgtttgataccctctatgccgaagggcagcggcgttatgttgaatcgctgtcgacttac
gcccgtcagttcctgtcgatgatggaaaagcccgatgtcgatctgattgaaggtctgtcg
cccgccatttccatcgagcagaaatccacatctcacaacccgcgctcaaccgttggtacc
gttacagaaatctacgattatctgcgcctgttgtttgcccgggtcggcacaccccgttgt
ccggaacatgacgttacgctggaggcacaaacggtcagccagatggtggatgccattatg
gatctgccggaagacggcaagtttatgattctggcgccggtggtacgtgaccgcaaaggc
gagcacctgcatatctttgaaagcctgcgggcgcagggctttatccgcgtacgggtgaat
gggctggtgtgtgatctggacgatacccccgagctggataaacgaaaaaaacacagcatc
gaagtggtggtagaccgctttaaaattaaggaaggtattgagcagcggttgtcggaatcg
ctggaaacctgcctggagctgagcggtggtattgcgctggtggcttctatggatgacgcc
gccgccgcccctttattattttcttcacaattttcctgtccgcattgtggttacagcctg
caggaactggagccgcgcttattttcgtttaacaacccggccggtgcctgcagtggctgt
gatggtttgggggtaaaacaatattttgaccccgatctggtggtgcaggatgccagcctg
agtattgccgaaggtgctattcgcggctgggaccggcgcagtatttattattaccagatg
cttacgtcggtggccgaccattacggatttgatattgataaaccctttgccaaattatca
gcccggcagcgggaattattgctgtacggcagcggcgatgatgccgtcaatttcagctac
atcaactcccgcggcgacagcattgttaaatcgcatccctttgaaggggtgctgcccaat
ttagagcgccgttaccgcgaaaccgactcgcaaatggtgctggaagaactggccaaatat
ttaagtgtgcagccttgtccggcctgtgaaggctcgcggttgcgtaccgaagcccgccat
gtctttatcggcgataaaaatattcatggctgcaccaccatgccggtagagcaggcgctg
gactattttaatcagctgcatctggccggccatcgtggtgaaattgccgaaaaaattctg
aaagaaatccgtgagcgtttacggtttctggtgaacgtggggctggaatatttaagttta
agccgcagctccgatacgctttccggtggcgaagctcagcgtatccggctggcgtcacaa
attggtgccgggctggtgggcgttatgtatatcctggatgagccgtccattggtctgcat
cagcgcgacaacgaccgtttgttaaaaaccctgttccatctgcgcgatctgggcaatacc
gtgttggtggtggaacatgatgaagatgccattcgcagcgccgatcatttaattgatatc
ggccccggtgctggcgtacatggcggccaggtcatcgcgcaaggcacaccagagcaggta
tttgccaaccccaattccattaccgggcaatttatgtcgggtaagcgtcgtattgaaata
ccggcgcagcgggtgccttttaataaagataaggtgctgactttaaaaggcgcgcgcggt
aacaacctgaataacgttgatttaaccattccgctgggtttaatgacttgcgtgaccggc
gtctcgggctctggtaaatcgactttaattaaccgcacgttattcccgctggcgtccacg
gcgctgaatggtgcgactacgttaaaagcagctgagcatgacagcattgtcggcctgaag
cagctggataaagtggtggatattgatcaaagtccgattggccgcacaccgcgttccaac
ccggcgacttacaccggtatttttaccccggtacgggatttatttgccggtacccaggaa
gcccgcgcgcggggctataaagccgggcgtttttcttttaacgtccgtggtggccgctgt
gaggcttgtcagggcgatggtgtgattaaagtggaaatgcacttcctggccgacatttat
gtgccctgtgatgtgtgcaaaggcaagcgttacaaccgcgaaacactggatatccgctac
aaaggcaagaatatccacgaagtactggaaatgacggtggaagatgcccgcaccttcttc
gatgctattccggcggtggcgcgcaaactgcaaaccttaatggatgtgggcctcagttat
atccggctggggcaggcggccaccaccttatcgggcggcgaagcacagcgggtcaaatta
tccaaagagctgtccaaacgcgacaccggccagacgctgtacatcctggatgagccgacc
accggcctgcatttccatgatattcagcaattactggacgtgctgcaccgcctgcgcgac
cacggtaataccgtggtgattatcgaacacaatctggacgtgattaaaaccgccgactgg
ctggtggatatgggcccggaaggcggttcgaaaggcgggtttattattgccgaaggcacg
ccggaacaggtggcggataaccccgcgtcgcacaccggccgcttccttaaaacgatgctg
gcggcagcaccggtggcagcaaccactggcaagaaaaagaccaagcgctga
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