KEGG   Venatoribacter cucullus: GJQ55_01730
Entry
GJQ55_01730       CDS       T07641                                 
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
  KO
K03701  excinuclease ABC subunit A
Organism
vcw  Venatoribacter cucullus
Pathway
vcw03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:vcw00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    GJQ55_01730 (uvrA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vcw03400]
    GJQ55_01730 (uvrA)
DNA repair and recombination proteins [BR:vcw03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     GJQ55_01730 (uvrA)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      GJQ55_01730 (uvrA)
SSDB
Motif
Pfam: UvrA_DNA-bind UvrA_inter ABC_tran SMC_N AAA_29 BCA_ABC_TP_C AAA_16 AAA_23 nSTAND1 RsgA_GTPase AAA_22 AAA_21 AAA_25 nSTAND3 NACHT DnaJ_CXXCXGXG NTPase_1 Viral_helicase1 cobW
Other DBs
NCBI-ProteinID: QQD23271
UniProt: A0A9X7UWD5
LinkDB
Position
342129..344999
AA seq 956 aa
MDKIQVRGARTHNLKNIDLDIPRDKLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSTY
ARQFLSMMEKPDVDLIEGLSPAISIEQKSTSHNPRSTVGTVTEIYDYLRLLFARVGTPRC
PEHDVTLEAQTVSQMVDAIMDLPEDGKFMILAPVVRDRKGEHLHIFESLRAQGFIRVRVN
GLVCDLDDTPELDKRKKHSIEVVVDRFKIKEGIEQRLSESLETCLELSGGIALVASMDDA
AAAPLLFSSQFSCPHCGYSLQELEPRLFSFNNPAGACSGCDGLGVKQYFDPDLVVQDASL
SIAEGAIRGWDRRSIYYYQMLTSVADHYGFDIDKPFAKLSARQRELLLYGSGDDAVNFSY
INSRGDSIVKSHPFEGVLPNLERRYRETDSQMVLEELAKYLSVQPCPACEGSRLRTEARH
VFIGDKNIHGCTTMPVEQALDYFNQLHLAGHRGEIAEKILKEIRERLRFLVNVGLEYLSL
SRSSDTLSGGEAQRIRLASQIGAGLVGVMYILDEPSIGLHQRDNDRLLKTLFHLRDLGNT
VLVVEHDEDAIRSADHLIDIGPGAGVHGGQVIAQGTPEQVFANPNSITGQFMSGKRRIEI
PAQRVPFNKDKVLTLKGARGNNLNNVDLTIPLGLMTCVTGVSGSGKSTLINRTLFPLAST
ALNGATTLKAAEHDSIVGLKQLDKVVDIDQSPIGRTPRSNPATYTGIFTPVRDLFAGTQE
ARARGYKAGRFSFNVRGGRCEACQGDGVIKVEMHFLADIYVPCDVCKGKRYNRETLDIRY
KGKNIHEVLEMTVEDARTFFDAIPAVARKLQTLMDVGLSYIRLGQAATTLSGGEAQRVKL
SKELSKRDTGQTLYILDEPTTGLHFHDIQQLLDVLHRLRDHGNTVVIIEHNLDVIKTADW
LVDMGPEGGSKGGFIIAEGTPEQVADNPASHTGRFLKTMLAAAPVAATTGKKKTKR
NT seq 2871 nt   +upstreamnt  +downstreamnt
atggacaagattcaggtacgcggggcgcgcacccacaaccttaagaacatcgatctggat
attccccgcgacaagctggtggtgatcactggtttaagcggttccggcaaatcttcgctg
gcgtttgataccctctatgccgaagggcagcggcgttatgttgaatcgctgtcgacttac
gcccgtcagttcctgtcgatgatggaaaagcccgatgtcgatctgattgaaggtctgtcg
cccgccatttccatcgagcagaaatccacatctcacaacccgcgctcaaccgttggtacc
gttacagaaatctacgattatctgcgcctgttgtttgcccgggtcggcacaccccgttgt
ccggaacatgacgttacgctggaggcacaaacggtcagccagatggtggatgccattatg
gatctgccggaagacggcaagtttatgattctggcgccggtggtacgtgaccgcaaaggc
gagcacctgcatatctttgaaagcctgcgggcgcagggctttatccgcgtacgggtgaat
gggctggtgtgtgatctggacgatacccccgagctggataaacgaaaaaaacacagcatc
gaagtggtggtagaccgctttaaaattaaggaaggtattgagcagcggttgtcggaatcg
ctggaaacctgcctggagctgagcggtggtattgcgctggtggcttctatggatgacgcc
gccgccgcccctttattattttcttcacaattttcctgtccgcattgtggttacagcctg
caggaactggagccgcgcttattttcgtttaacaacccggccggtgcctgcagtggctgt
gatggtttgggggtaaaacaatattttgaccccgatctggtggtgcaggatgccagcctg
agtattgccgaaggtgctattcgcggctgggaccggcgcagtatttattattaccagatg
cttacgtcggtggccgaccattacggatttgatattgataaaccctttgccaaattatca
gcccggcagcgggaattattgctgtacggcagcggcgatgatgccgtcaatttcagctac
atcaactcccgcggcgacagcattgttaaatcgcatccctttgaaggggtgctgcccaat
ttagagcgccgttaccgcgaaaccgactcgcaaatggtgctggaagaactggccaaatat
ttaagtgtgcagccttgtccggcctgtgaaggctcgcggttgcgtaccgaagcccgccat
gtctttatcggcgataaaaatattcatggctgcaccaccatgccggtagagcaggcgctg
gactattttaatcagctgcatctggccggccatcgtggtgaaattgccgaaaaaattctg
aaagaaatccgtgagcgtttacggtttctggtgaacgtggggctggaatatttaagttta
agccgcagctccgatacgctttccggtggcgaagctcagcgtatccggctggcgtcacaa
attggtgccgggctggtgggcgttatgtatatcctggatgagccgtccattggtctgcat
cagcgcgacaacgaccgtttgttaaaaaccctgttccatctgcgcgatctgggcaatacc
gtgttggtggtggaacatgatgaagatgccattcgcagcgccgatcatttaattgatatc
ggccccggtgctggcgtacatggcggccaggtcatcgcgcaaggcacaccagagcaggta
tttgccaaccccaattccattaccgggcaatttatgtcgggtaagcgtcgtattgaaata
ccggcgcagcgggtgccttttaataaagataaggtgctgactttaaaaggcgcgcgcggt
aacaacctgaataacgttgatttaaccattccgctgggtttaatgacttgcgtgaccggc
gtctcgggctctggtaaatcgactttaattaaccgcacgttattcccgctggcgtccacg
gcgctgaatggtgcgactacgttaaaagcagctgagcatgacagcattgtcggcctgaag
cagctggataaagtggtggatattgatcaaagtccgattggccgcacaccgcgttccaac
ccggcgacttacaccggtatttttaccccggtacgggatttatttgccggtacccaggaa
gcccgcgcgcggggctataaagccgggcgtttttcttttaacgtccgtggtggccgctgt
gaggcttgtcagggcgatggtgtgattaaagtggaaatgcacttcctggccgacatttat
gtgccctgtgatgtgtgcaaaggcaagcgttacaaccgcgaaacactggatatccgctac
aaaggcaagaatatccacgaagtactggaaatgacggtggaagatgcccgcaccttcttc
gatgctattccggcggtggcgcgcaaactgcaaaccttaatggatgtgggcctcagttat
atccggctggggcaggcggccaccaccttatcgggcggcgaagcacagcgggtcaaatta
tccaaagagctgtccaaacgcgacaccggccagacgctgtacatcctggatgagccgacc
accggcctgcatttccatgatattcagcaattactggacgtgctgcaccgcctgcgcgac
cacggtaataccgtggtgattatcgaacacaatctggacgtgattaaaaccgccgactgg
ctggtggatatgggcccggaaggcggttcgaaaggcgggtttattattgccgaaggcacg
ccggaacaggtggcggataaccccgcgtcgcacaccggccgcttccttaaaacgatgctg
gcggcagcaccggtggcagcaaccactggcaagaaaaagaccaagcgctga

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