Venatoribacter cucullus: GJQ55_03305
Help
Entry
GJQ55_03305 CDS
T07641
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
vcw
Venatoribacter cucullus
Pathway
vcw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vcw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GJQ55_03305 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcw03019
]
GJQ55_03305 (pnp)
03016 Transfer RNA biogenesis [BR:
vcw03016
]
GJQ55_03305 (pnp)
Enzymes [BR:
vcw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
GJQ55_03305 (pnp)
Messenger RNA biogenesis [BR:
vcw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
GJQ55_03305 (pnp)
Transfer RNA biogenesis [BR:
vcw03016
]
Prokaryotic type
tRNA degradation factors
GJQ55_03305 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
S1_RRP5
KH_2
KH-I_KHDC4-BBP
S1_2
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
QQD23569
UniProt:
A0A9X7V0W3
LinkDB
All DBs
Position
669955..672063
Genome browser
AA seq
702 aa
AA seq
DB search
MSTKPVAKIKTFQFGNETVTLETGRIARQADGAVLATMGKTQVLATVVAAKSVKAGQDFF
PLSVHYQEKMYAAGRVPGGYLKREGRPSEKETLTSRLIDRPIRPLFPEGFMNEVQVLLTV
MGAEKDVDPDICAMIATSAALAVSGIPFNGPIGGARVGFTEEDGYLLNPTYSQLQDSLLD
MVVAGTKDAVLMVESQAQELTEDEMLGAVLFAHTAFQSAITAISEWTTELGIQQWDWQAE
ARNEALYSAVKAETAAAISEAYTISDKMARYARLDEIKNAAVEKLAAKEGEEGFSADEIA
DMVGTLKYEVVRNRVIEGQPRIDGRDNDTVRPLTIETGVLPTTHGSAMFTRGETQAIVVT
TLGSTRDAQMMDSLFGTVTDPFLFHYNFPPYSVGEAGRIGAVGRREIGHGRLARRGVTAM
MPSFEEFPYTIRVVSEITESNGSSSMASVCGASLALMDAGVPIKAPVAGIAMGLVKEGDK
FAVLTDILGDEDHLGDMDFKVAGTDEGITALQMDIKIEGITEQIMEIALEKARAARLHIL
EQMNEVIAEPRKQLADNAPTMTTMKIPSDKIREVIGKGGATIRDITEKSGAAIDINDDGE
IKIFAAGKEAADIARGMIEAITADIEVGVTYTGKVSKIVDFGAFITVLPGKDGLLHISQI
SDERVENVSDYLKEGQIVNVHVADVDPKGRIKLTMKGVEQPA
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atgagcacaaaacccgttgctaagatcaaaaccttccagttcggtaatgaaaccgtcact
ctggaaaccggccgtatcgcccgtcaggctgatggtgccgtactggctaccatgggcaaa
acccaggtgctggctactgttgttgccgctaaaagcgtaaaagccggtcaggatttcttc
ccgctgtccgtgcattaccaggaaaaaatgtacgctgccggtcgtgtacctggtggttac
ctgaagcgtgaaggccgtccgtcagaaaaagaaaccctgacgtcccgtctgatcgaccgt
ccgatccgtccgctgtttccggaaggcttcatgaacgaagttcaggtactgctgaccgta
atgggcgccgagaaagacgttgatccggatatctgcgccatgatcgccacctctgccgcg
ctggccgtgtctggtattccgttcaatggcccgatcggtggtgcccgtgtcggtttcacc
gaagaagatggctacctgctgaacccgacctacagccagctgcaggactcgctgctggac
atggtcgtagccggtaccaaagacgccgtactgatggtggaatctcaggctcaggaactg
accgaagacgaaatgctgggtgccgtattgttcgcgcacacggcattccaatccgccatt
accgccatcagcgagtggaccaccgaactgggtatccagcagtgggactggcaggctgaa
gcccgtaacgaagcgctgtacagcgccgttaaagcagaaaccgccgctgccatcagcgag
gcttacaccatttctgacaaaatggcccgttacgcccgtctggacgaaatcaaaaacgcc
gccgttgaaaaactggccgctaaagaaggcgaagaaggtttctctgccgacgaaatcgcc
gacatggttggcaccctgaagtatgaagtggtgcgtaaccgcgtgatcgaaggccagccg
cgtatcgacggtcgtgataacgacaccgtgcgtccgctgaccatcgaaaccggtgtactg
ccgaccactcacggttccgccatgttcacccgtggtgaaactcaggccatcgtggtgacc
acactgggttctacccgtgatgcacagatgatggattccctgtttggtaccgtcactgac
ccgttcctgttccattacaacttccctccctactccgtgggtgaagcgggtcgtattggt
gcggtaggtcgtcgtgaaatcggtcacggtcgtctggcccgtcgtggtgtaaccgctatg
atgccgagctttgaagagttcccgtacaccatccgtgtggtatctgagatcactgaatcc
aacggttcatcttctatggcgtctgtgtgtggtgcctctctggcgctgatggacgctggt
gtaccgatcaaggcaccggttgccggtatcgccatgggtctggttaaggaaggcgacaag
tttgccgttctgaccgacattctgggtgacgaagaccacctgggcgacatggacttcaaa
gtagccggtaccgatgaaggtattaccgcgctgcagatggacatcaagatcgaaggcatc
accgaacagatcatggaaatcgcgctggaaaaagcccgcgcggcccgtctgcacattctg
gagcagatgaacgaagtgattgccgagccgcgtaagcagctggccgacaacgctccgacc
atgaccaccatgaagatcccgtctgacaagatccgtgaagtgatcggtaaaggtggcgcc
accatccgtgacatcaccgaaaaatccggtgcggcgatcgacatcaatgacgacggcgaa
atcaaaatctttgccgctggcaaagaagcggccgatattgcccgcggcatgattgaagcc
atcactgccgatatcgaagtgggcgtgacctacaccggtaaagtcagcaagatcgttgat
ttcggtgccttcattaccgtactgccgggtaaagatggtctgctgcacatctcccagatc
agcgatgagcgcgtggaaaacgtctccgactacctgaaagaaggtcagatcgtgaacgta
cacgtcgccgatgtggacccgaaaggccgcattaagctgaccatgaaaggtgttgaacaa
ccggcgtaa
DBGET
integrated database retrieval system
