Venatoribacter cucullus: GJQ55_03885
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Entry
GJQ55_03885 CDS
T07641
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
vcw
Venatoribacter cucullus
Pathway
vcw00521
Streptomycin biosynthesis
vcw00523
Polyketide sugar unit biosynthesis
vcw00541
Biosynthesis of various nucleotide sugars
vcw01100
Metabolic pathways
vcw01110
Biosynthesis of secondary metabolites
vcw01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
vcw00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
GJQ55_03885 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
GJQ55_03885 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
GJQ55_03885 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
GJQ55_03885 (rfbB)
00525 Acarbose and validamycin biosynthesis
GJQ55_03885 (rfbB)
Enzymes [BR:
vcw01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
GJQ55_03885 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
3Beta_HSD
adh_short
NmrA
Motif
Other DBs
NCBI-ProteinID:
QQD23677
UniProt:
A0A9X7UV76
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Position
801514..802569
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AA seq
351 aa
AA seq
DB search
MRRLLVTGAAGFIGANFIEYWQQQYPQDFILALDALTYAGNIRNLDRARQQPNFEFVQGN
IADQALIEHCLRHYQLDTLVNFAAESHVDRSISDPAIFLHTNILGTFSLLQAARTVWQEE
PRARGEAPVKHRFHHVSTDEVFGDLGEQGEPFVETSRYQPSNPYSATKAASDHLLMAWAR
TYGLHVSLSNCSNNFGIYQYPEKLMPRVITNILHNRPLPVFGSGLQVRDWLYVHDHAAGI
DRILQAGQPGCYYNIGGRNERTNIEVIKLLCESVENFLQENPDLQARYPQAQQALAGNAA
ALIQYVADRPGHDQRYAINPDKIERELGFRPQHDFRAALRTTVEWYLQYFA
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgagacgactgctggttaccggcgccgccggctttattggcgccaattttattgaatac
tggcagcagcagtatccgcaggattttattctggcgctggatgcgcttacttatgcgggc
aatatccgtaatctggaccgcgcacggcagcagcctaattttgaatttgtgcagggcaat
atcgccgatcaggcgttaattgaacattgcctgcgccattaccagctggatacgctggtg
aattttgctgctgaatcgcacgttgaccgctccatcagcgatccggcgatttttttgcac
accaatattctcggtactttcagtttactgcaggcagcgcgcacggtctggcaggaagaa
ccgcgcgcccgtggtgaagcgcccgttaaacatcgctttcatcatgtgtccaccgatgaa
gtgttcggcgacctgggtgagcagggcgagccttttgtggaaaccagccgctaccagccg
agtaacccgtattccgccaccaaagccgcgtccgaccatttattaatggcctgggcacgc
acctacggactgcacgtcagtttatcgaattgctcgaataatttcggaatttaccaatac
ccggaaaagctgatgccgcgggtgattaccaatattctgcacaaccggccgctgccggta
ttcggcagtggtttgcaggtgcgcgactggctgtatgtgcacgaccacgcagcgggcatt
gaccgtattctgcaggccggccagcctggttgttattacaatattggcggacgtaacgaa
cgcacgaatattgaggtgattaaactgctgtgcgaatcagtggaaaattttttgcaggaa
aacccggacttgcaggcgcgttatccgcaggcgcagcaggcgctggccggtaacgcggcg
gcgcttattcaatacgtcgctgaccggcccggtcacgaccagcgttatgcgattaatccg
gataaaattgaacgggaattaggcttccggccgcagcatgatttccgtgcggcgttacgg
acaacggtggagtggtatttgcagtattttgcctga
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