Venatoribacter cucullus: GJQ55_04590
Help
Entry
GJQ55_04590 CDS
T07641
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
vcw
Venatoribacter cucullus
Pathway
vcw03410
Base excision repair
vcw03430
Mismatch repair
vcw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vcw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GJQ55_04590 (recJ)
03430 Mismatch repair
GJQ55_04590 (recJ)
03440 Homologous recombination
GJQ55_04590 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcw03400
]
GJQ55_04590 (recJ)
DNA repair and recombination proteins [BR:
vcw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
GJQ55_04590 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GJQ55_04590 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
GJQ55_04590 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
RecJ_OB
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
QQD25429
UniProt:
A0A9X7V4D6
LinkDB
All DBs
Position
954755..956467
Genome browser
AA seq
570 aa
AA seq
DB search
MVQITQRPLLTDPGALPVHPVLARVYGARGISRPEQLELTLKRLLPWQSLKGITEAVELL
LPVVLQGKKLLVVGDFDVDGASSTALAIRALRMLGAQQLDYLVPNRFDFGYGLSPELVQV
ALTLKPDLIMTVDNGIASHEGIAAAQAAGVPVLVTDHHLAAATLPDAAAIVNPNQPGCEF
PSKAACGCTVVFYLMLALRARLSELNKLPDPQPNLAQLLDLVALATVADVVPLDDNNRIL
VEQGLRRIRAGHSSAGIMALIQVAGRQAVRLVAADFGFALGPRLNAAGRLDDMSLGIECL
LTDDPGRAQQLAQTLDEMNRDRRDIEQGMQAEALRYLQQFDAGNNLPTGLVLFQRDWHQG
VIGILASRIKEKTHRPVIALAADDQGWLKGSARSIAGLHLRDALDEVHKQAPHLMKKFGG
HAMAAGLTLAADGLDEFSRLFDQVCRRHLTEAQLQQRLETDGALNAADFSFELAQQLRWG
GPWGQAFPEPLFSGRFRLVQQRIVGEKHLKLVLQPEGSDLVLDAIWFGIDTSQWPDPSVQ
WVEAAFQLDINEFRGQKTLQLMLREVVKIS
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagattacgcagcgaccgttattaaccgatcccggggctttgccggtgcacccg
gtactggcgcgggtctatggtgcgcgcggcatcagccggccagaacagctggaactgacc
ttaaaacgcctgctgccgtggcagagcctgaaaggcattaccgaggcggtggagctgctg
ttgccggtggtgttgcagggcaaaaaactgctggtggtcggcgatttcgacgtcgatggt
gccagcagtacggcgctggcgatccgcgccttgcggatgctgggggcgcagcaactggat
tacttagtgccgaaccgctttgatttcggttatggcctgtcgcccgagctggtgcaagtg
gcgctgacactaaagcccgatctgattatgacggtggataacggcatcgcctcgcatgag
ggtattgcagcagctcaagcggccggtgtgccggtgctggtgaccgatcaccatctggca
gctgcgaccttgccggatgcggctgccatcgtgaatccgaaccagccaggctgtgaattt
ccctccaaagccgcctgcggctgcaccgtggtgttttatctgatgctggcgctgcgggcg
cgattgtcagagctgaataaactgcccgacccgcaacccaatctggcgcagctgcttgat
ctggtcgctcttgccacggtggccgatgtggtgccgctggacgataacaaccgcattctg
gtcgagcagggcctgcgccgtatccgcgccggccacagcagtgccggtattatggccctg
attcaggtggcgggccggcaagcggtgcgcttagtagccgctgattttggttttgcgctg
ggaccacgactgaacgccgccgggcggctggacgatatgtcactcggcattgagtgctta
ctcaccgatgacccggggcgtgcgcagcagctggcacaaacactggatgaaatgaaccgc
gaccgccgcgatattgaacaggggatgcaggccgaagcattgcggtatctgcagcagttc
gatgccggtaacaatctgcccaccgggctggtgctgtttcaacgcgactggcatcagggc
gtaatcggcattctggcctcgcgcatcaaagaaaaaacccaccgtccggtgattgcgctg
gcggctgacgatcagggctggctgaaaggttcggcgcgttccattgccggtttgcatttg
cgcgacgcgctggacgaagtacacaagcaagcaccgcatttaatgaaaaaattcggcggt
catgccatggcggcgggcttaacgctggcagccgacgggctggacgaattcagccggctg
tttgatcaggtctgccggcggcatctcaccgaagcacaattgcagcaacggctggaaact
gatggtgccttaaacgccgccgatttcagttttgaactggcgcaacagctgcgctggggc
gggccctggggccaggcctttcccgagccgctgttcagtggccgcttccggttggtgcag
cagcgtattgttggcgagaagcatctgaaactggtgttgcagcccgaaggcagtgatctg
gtgctggatgccatctggtttggcattgataccagccagtggccggacccgtcagtgcaa
tgggttgaggccgcgtttcagctggatattaatgaattccgtggccagaagactctgcag
ttaatgctgcgtgaggtggtcaaaatttcatag
DBGET
integrated database retrieval system
