Venatoribacter cucullus: GJQ55_06235
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Entry
GJQ55_06235 CDS
T07641
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
vcw
Venatoribacter cucullus
Brite
KEGG Orthology (KO) [BR:
vcw00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vcw01011
]
GJQ55_06235
Enzymes [BR:
vcw01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
GJQ55_06235
Peptidoglycan biosynthesis and degradation proteins [BR:
vcw01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
GJQ55_06235
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Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM1_NFP_LYK
NMB0315_dom_I
DUF3071
LysM_RLK
LysM3_NFP
LysM2_CERK1_LYK3_4_5
DUF6491
Motif
Other DBs
NCBI-ProteinID:
QQD24097
UniProt:
A0A9X7UW24
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Position
complement(1332373..1333938)
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AA seq
521 aa
AA seq
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MKVITLFLLSAAPLAFLSACSSIPGPDTHAEEQRRTENSLTLLDDWQPEAQPQAAYEDIW
QRIIASYKLDLNSSNPRIDSQLNWYKSHQNYLDRVAERGVRYLHFIAEQIEARGVPGELA
LLPIVESAFEPFAYSHGRASGVWQFIPATGRDFGLQQDWWHDGRRDIRASTEAALTYLDA
LQREFNGDWMLALASYNSGAGTVRRAMRRNRERGLPTDFWSLDLPRETRDYVPKLIALAK
LIRDPERYNVTLLPVPDEPYFAVANTGGQIDLAQVAELADTSLEEIYRLNPSYNRWATRP
AGPHEILIPVAQLDVFSERLAALPDSARIKWQRYAVKSGDSLITIARQFNTTPDALKDTN
NIRGNIIRAGEQLLIPVAFRSPETYSHSQQQRLNRLVSQRQPANTSRISYQVRSGDTLWD
IARAHDVQVAALARWNGMAPRDPLRPGQQLVIWSQKNSASPAQREVIRKIQYRVRSGDSL
ARISQRYNVRVSDVKRWNQAQVKNKYLQPGQLLTLYVDVTR
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttatcactttattcctcctgtcggcagcaccgctggcttttctgagcgcctgc
agcagcattcccggccccgatactcatgccgaggaacagcgccgtaccgaaaacagcctg
actctgcttgacgactggcaacctgaagctcagccgcaggccgcttacgaggatatctgg
cagcgcattatcgcttcttacaagctggatctgaacagcagcaacccacgcatcgactcg
caactgaactggtataagtcccatcagaattaccttgaccgtgtcgccgagcgcggtgtg
cggtatctgcattttattgctgaacaaattgaagcccgcggcgtacccggtgaactggcc
ttactgcccattgtggaaagcgccttcgagccttttgcctattcccatggccgcgcctcc
ggggtgtggcagtttattccggccaccggccgtgattttggtctgcaacaggactggtgg
catgacggccggcgcgatatccgcgcttccaccgaagcagccctgacttatctggatgcc
ctgcaacgggaatttaacggtgactggatgctggctctggcgtcgtacaattccggcgcc
ggcaccgtacgccgggccatgcgccgcaaccgcgagcggggcctgccgaccgatttctgg
tcgcttgatctgccccgcgaaacccgcgattacgtccctaaactgattgccctggccaaa
ctgatccgggacccggagcgctacaatgtcacattgctgccggtaccggacgagccgtac
ttcgccgtcgccaataccggcggccagattgatctggcccaggtcgctgaactggccgat
acctcactggaagaaatttaccggctgaatcccagctataaccgctgggctacacgacca
gccggcccgcatgaaattctgattccggtggctcagctggatgtcttcagcgaacggctg
gccgccctgcccgattccgcccgcatcaaatggcagcgctatgccgtgaaatccggcgac
agcctgattaccatcgcccgtcagttcaacaccacaccggatgcgctgaaagacaccaac
aatatccgcggcaatattatccgtgccggtgaacagctgctgattccggtggcgttccgc
tcaccggaaacctactcccacagtcagcagcaacgtctgaatcgcctggtcagccagcgc
cagccggccaataccagccgcatcagttatcaggttcgttccggtgacaccctgtgggat
atcgcccgcgcccacgatgtccaggttgccgccctggcccgctggaatggcatggccccg
cgtgatccgctgcgccccggtcagcagctggtgatctggagccagaaaaacagcgccagt
ccggcccagcgtgaagtcatccgtaaaattcagtaccgggtacgctcaggcgattcactg
gcgcggatttcccagcgttacaacgtgcgtgtttccgacgttaaacgctggaatcaggcc
caggtaaaaaacaaatacctgcaaccgggccaactgctgaccctgtacgttgatgtaacg
cgctaa
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