Venatoribacter cucullus: GJQ55_08775
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Entry
GJQ55_08775 CDS
T07641
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
vcw
Venatoribacter cucullus
Pathway
vcw00071
Fatty acid degradation
vcw00280
Valine, leucine and isoleucine degradation
vcw00310
Lysine degradation
vcw00362
Benzoate degradation
vcw00380
Tryptophan metabolism
vcw00410
beta-Alanine metabolism
vcw00640
Propanoate metabolism
vcw00650
Butanoate metabolism
vcw00907
Pinene, camphor and geraniol degradation
vcw00930
Caprolactam degradation
vcw01100
Metabolic pathways
vcw01110
Biosynthesis of secondary metabolites
vcw01120
Microbial metabolism in diverse environments
vcw01200
Carbon metabolism
vcw01212
Fatty acid metabolism
Module
vcw_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
vcw00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
GJQ55_08775 (fadB)
00650 Butanoate metabolism
GJQ55_08775 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
GJQ55_08775 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
GJQ55_08775 (fadB)
00310 Lysine degradation
GJQ55_08775 (fadB)
00380 Tryptophan metabolism
GJQ55_08775 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
GJQ55_08775 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
GJQ55_08775 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
GJQ55_08775 (fadB)
00930 Caprolactam degradation
GJQ55_08775 (fadB)
Enzymes [BR:
vcw01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
GJQ55_08775 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
GJQ55_08775 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
GJQ55_08775 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
GJQ55_08775 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Motif
Other DBs
NCBI-ProteinID:
QQD24552
UniProt:
A0A9X7YQ02
LinkDB
All DBs
Position
complement(1856461..1858608)
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVNMIEGGIAELKFDLQGDSVNKFNRVTLEDLQAAVAAVQGNSDVKGVLVTS
GKDVFIVGADITEFGDAFKKSEEEIAAWVAQANVIFNAFEDLPVPTLTAINGIALGGGFE
MCLASDLRVMSDKAKVGLPEVKLGLMPGFGGTVRLPRVIGADNAIEWICMGAENRADKAL
KDGAVDAVVAADKLREAAVAMLQSAIAGELNWQARREEKKAKLKLNAMESMMVFETAKGF
VAGQTKGQYPAPIEAIKTMQKAAGQGRDKALEAEAKGFAKLAKTTESQALIGLFMNDQLL
KKKAKVYGKTAKPTKKAAVLGAGIMGGGIAYQSALKGTPIMMKDIAEAGIELGLSEANKL
LAKRVEKKRMKPLEMGDVLNRIRPTLSYAEFNDVDTVVEAVVENPKVKKMVLAELEDKVR
EETIITSNTSTISIDLLAADLKRPENFLGMHFFNPVHMMPLVEIIRGKKTSEEAVATVVA
YATAMGKTPIVVNDCPGFLVNRVLFPYFAGFAGLLRDGADFQAVDKVMEKFGFPMGPAYL
LDVVGIDTGVHANEVMAEGFPDRMKADFKSAMEVMYENKRYGQKNGVGFYKYETDKKGKP
KKVVDQAAYDLIAPVVAERKEYDAEEIIARCMIPMCIEIARCLEEGIVDTPNEADMGLIF
GIGFPPFRGGACRYMDTVGMANFVALCDKFASLGNLYKPTDRMREMAANGESYFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggtaaatatgatcgaaggcggcatcgccgaactg
aaattcgatctgcaaggcgactcagtcaacaaatttaaccgcgtaaccctcgaagacctg
caagccgccgtggctgcagtgcagggcaacagcgatgttaaaggcgtactggtaacttcc
ggtaaagacgtatttatcgttggcgccgacatcaccgaattcggcgacgcattcaagaaa
agcgaagaagaaattgctgcctgggttgctcaggccaacgttatcttcaacgcctttgaa
gatctgccggttccgaccctgactgccatcaacggtatcgctctgggtggcggttttgaa
atgtgtctggcctctgacctgcgcgttatgtctgacaaagccaaagtcggtctgccggaa
gtgaagctgggcctgatgccaggcttcggtggtactgtgcgtctgccgcgtgttatcggt
gctgataacgctatcgaatggatctgcatgggcgctgaaaaccgtgccgacaaagccctg
aaagatggtgctgtggatgccgtggttgctgctgacaagctgcgtgaagccgctgttgcc
atgctgcagtctgctattgccggtgaactgaactggcaagcccgtcgcgaagagaagaaa
gccaagctgaaactcaacgccatggaaagcatgatggtttttgaaaccgctaaaggtttc
gtggctggtcagaccaaaggtcagtacccggcaccgatcgaagcgatcaaaaccatgcag
aaagccgctggtcagggccgtgataaggcgctggaagcagaagccaaaggtttcgccaaa
ctggctaagaccactgaatcccaggctctgatcggtctgttcatgaacgatcagctgctg
aagaaaaaagccaaggtttacggtaaaaccgctaagccgaccaaaaaagcggccgtactg
ggcgctggcatcatgggtggcggtatcgcctatcagtctgccctgaaaggcactccgatc
atgatgaaagacatcgccgaagccggtatcgagctgggcctgtctgaagcgaacaaactg
ctggccaagcgcgttgagaaaaaacgcatgaagccgctggaaatgggtgacgtgctgaac
cgcatccgtccgaccctgtcttacgcggaattcaatgacgtcgacactgtcgtggaagcc
gttgttgaaaacccgaaagtgaagaaaatggtactggccgaactggaagacaaagttcgc
gaagagaccatcatcacgtccaacacctcaaccatcagcatcgacctgctggcggctgac
ctgaagcgtccggaaaacttcctcggtatgcacttcttcaacccggtacacatgatgccg
ctggttgaaattatccggggcaagaaaacctctgaagaagccgttgccactgtggttgct
tacgccactgctatgggcaaaaccccgatcgtggtaaacgattgcccgggcttcctggta
aaccgcgtactgttcccatacttcgctggttttgctggcctgctgcgtgacggtgctgac
ttccaggccgttgacaaagtgatggaaaaattcggcttcccgatgggcccggcttacctg
ctggacgtagtgggtatcgacaccggtgtacacgccaacgaagtaatggcggaaggcttc
ccggaccgtatgaaggctgacttcaagtctgctatggaagtgatgtacgaaaacaaacgc
tacggtcagaagaacggcgttggtttctacaagtacgaaaccgacaagaaaggcaagccg
aagaaagtggttgaccaggctgcttacgacctgatcgctccggttgtggccgagcgtaaa
gagtacgacgccgaagaaattattgcccgctgcatgattccgatgtgcatcgagatcgcc
cgctgtctggaagaaggcatcgttgatactccgaacgaagccgacatgggtctgatcttt
ggtattggtttccctccgttccgtggcggtgcttgccgttacatggacaccgtgggtatg
gctaacttcgttgctctgtgtgacaagttcgcgagccttggcaacctgtacaaaccaacc
gatcgtatgcgtgaaatggctgcgaacggcgaaagctacttcggttaa
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