Venatoribacter cucullus: GJQ55_11040
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Entry
GJQ55_11040 CDS
T07641
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
vcw
Venatoribacter cucullus
Brite
KEGG Orthology (KO) [BR:
vcw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
vcw03016
]
GJQ55_11040 (truD)
Enzymes [BR:
vcw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
GJQ55_11040 (truD)
Transfer RNA biogenesis [BR:
vcw03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
GJQ55_11040 (truD)
Prokaryotic type
GJQ55_11040 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
QQD24969
UniProt:
A0A9E8FLZ0
LinkDB
All DBs
Position
complement(2343368..2344435)
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AA seq
355 aa
AA seq
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MNSETSINPAPISNPSAGSALPDWPQAYPATGAHALLKQHNEDFRVEEIPQALPCGEGEH
VWLHIEKNGANTAWIAKKLAALAGVKEMDVGYAGLKDRHAITRQWFSIYLPRVQEPDFSV
LNDAEMTVLSQSRHSKKLRRGDLLGNRFTLLLRRFEGDKAAVEANLAQIKTLGVPNYFGE
QRFGHDGGNIEAGRAMLAGEIRVRNPGKKSIYLSAVRSLLFNNVLAERIRQGLWGQTLAG
EVRDEQGLPTGPLWGRGRLSSTDEVLALETAVAGQLPLLCDGLEHAGLKQERRALSAVPE
QLRWQWQQGQDNPESVDLMLTFSLPAGYYATSVLREITKTEEPERLGTHESDAVE
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgaactccgaaaccagcatcaacccggcacccatttccaatccgtcagccggcagcgcc
ttgcctgactggccgcaggcctatccggccaccggcgcccacgccctgctgaagcagcac
aacgaggatttccgggtcgaagaaatcccgcaggctctgccctgcggtgagggcgagcac
gtctggctgcatattgaaaagaacggcgccaataccgcctggattgccaagaagctggcc
gcgctggccggagtaaaggaaatggatgtcggctacgccggtctgaaagaccgccatgcc
attacccggcagtggttcagcatttatctgccgcgggtgcaggagccggatttcagtgtg
ctgaacgacgctgaaatgaccgtgctcagccagagccggcacagcaaaaaactgcgccgc
ggcgacctgctgggcaaccgttttaccctgttgttgcgtcggtttgagggcgataaagcg
gcggtggaagccaatctggcacagattaaaaccctcggcgtaccgaactattttggtgag
cagcgtttcggccatgacggcggcaatatcgaagccggccgcgccatgctggcgggtgaa
attcgtgtacgtaacccgggcaagaaaagcatttatctgtcggccgtgcggtcactgctg
tttaacaacgttctggctgagcgcatccggcaggggctgtggggccaaaccctggccggt
gaagtccgtgatgaacaaggcctgccgaccgggccgctgtgggggcgtggccgtctgagc
agcaccgatgaggtactggcgctggaaacagccgtcgccgggcagttgccactgctgtgc
gacgggctggagcacgccggtctgaaacaggagaggcgggcgctgagtgctgtgccggag
caactgcgctggcaatggcagcaaggtcaggacaacccggaaagtgtcgatttaatgctc
accttttccctgcctgccggttattatgcgacctctgtactccgtgaaataacaaaaacc
gaggagcccgagcggcttggtacgcatgaatctgatgctgtcgaatga
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