Venatoribacter cucullus: GJQ55_11370
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Entry
GJQ55_11370 CDS
T07641
Name
(GenBank) MBL fold metallo-hydrolase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
vcw
Venatoribacter cucullus
Pathway
vcw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vcw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
GJQ55_11370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vcw03019
]
GJQ55_11370
Messenger RNA biogenesis [BR:
vcw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
GJQ55_11370
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Motif
Pfam:
RNase_J_b_CASP
Lactamase_B
RMMBL
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
QQD25034
UniProt:
A0A9X7YPU9
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Position
complement(2405588..2406970)
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AA seq
460 aa
AA seq
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MTPSERDLFFLPLGGTGEIGMNMNLYGHDGQWLMVDCGVTFPRPGRVVADGSVHQAGEPD
IQMADPDFIVRHRDQLAGLIITHAHEDHIGAVPYLWSKLRCPVYCTRFTAEVLKKKLVEQ
GLLHRVKIIVPETGERLQIGTFNVQWLALTHSVPDPNALMIRTPAGNIFHTGDWKLDPEP
MVGHGYRQDTFTQLATEGVRAMVCDSTNATVNGHSASEGELYEGLRHYIETAPGRVIVTC
FGSNIARLLTLSHVADDTGRYMGLYGRSMVTMFQCAKRAGVWPYSAGTVDTGHLGYLPRH
EVLAVATGSQGEPRTALRRLAAGTHPDFDLEPGDRVIFSARAIPGNEDSIAGLIRQLESR
GVEVITAEMAIKPIHASGHPAQQELETLYRWVQPQIAIPVHGEAVHMQAHAELAKACGVP
RILTGRNGDLFMLSNNPGIQRQKVQTGRLGWDKGKLVRVD
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgactccttctgagcgcgatctgttctttctgccgttaggcggcaccggtgagatcggc
atgaacatgaatctgtacggccacgatggccagtggctgatggtggactgcggtgtgacc
ttcccgcgtcccggccgcgttgtagcggatggttcggtgcatcaggccggagagccagat
attcagatggctgatccggattttatcgtccgccaccgtgaccagctggccgggctgatt
attacccacgcccacgaagatcatatcggggccgtgccttacctgtggtctaagttacgt
tgcccggtgtattgcacgcggttcaccgccgaagtgctgaagaagaaactggtcgaacag
ggcttgctgcaccgggtaaaaatcatcgtgcccgagaccggcgagcgcctgcagattggc
acgttcaatgtgcaatggctggcgctgacgcattcagtccccgaccccaacgcgctgatg
atccgcactccggccggtaatattttccacaccggcgactggaaactcgaccccgagccg
atggtcgggcatggctaccggcaagacacctttacccaactggccacggaaggtgtgcgc
gccatggtgtgtgattccaccaacgccacggtgaatggtcactctgcttccgaaggcgag
ctgtacgaaggcctgcgccattacattgaaaccgcaccggggcgggtgattgttacctgt
ttcggcagcaacatcgcccgcctgttaaccctgtcccatgtggcggacgataccggccgt
tatatgggcctgtacggtcgttcgatggtgaccatgttccagtgcgccaagcgcgctgga
gtctggccctacagtgccggcaccgtggacaccgggcacctggggtatttaccacgccat
gaagtgctggccgtggccaccggcagtcagggcgaaccgcgcacagcactgcgccggctg
gccgctggcacgcatcccgattttgatctggaacccggcgaccgggtgattttcagcgcc
cgcgccattccgggcaacgaagactccattgccgggctgatccggcagctggaaagccgc
ggcgtggaagtaatcaccgccgaaatggcgattaagcccattcacgcctccgggcatccg
gcccagcaagagctggaaaccctgtaccgctgggtacagccgcagattgccattccggta
catggcgaagccgtgcacatgcaggcccatgcagaattggcgaaagcctgcggcgtgccg
cgcatcctgaccggacggaacggcgacctgtttatgctcagtaataatcccggcattcag
cgccagaaagtacagaccggccggctcggctgggacaagggtaagctggtgcgggttgat
tga
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