KEGG   Venatoribacter cucullus: GJQ55_11370
Entry
GJQ55_11370       CDS       T07641                                 
Name
(GenBank) MBL fold metallo-hydrolase
  KO
K12574  ribonuclease J [EC:3.1.-.-]
Organism
vcw  Venatoribacter cucullus
Pathway
vcw03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:vcw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    GJQ55_11370
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vcw03019]
    GJQ55_11370
Messenger RNA biogenesis [BR:vcw03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     GJQ55_11370
SSDB
Motif
Pfam: RNase_J_b_CASP Lactamase_B RMMBL Lactamase_B_2 Anti-Pycsar_Apyc1
Other DBs
NCBI-ProteinID: QQD25034
UniProt: A0A9X7YPU9
LinkDB
Position
complement(2405588..2406970)
AA seq 460 aa
MTPSERDLFFLPLGGTGEIGMNMNLYGHDGQWLMVDCGVTFPRPGRVVADGSVHQAGEPD
IQMADPDFIVRHRDQLAGLIITHAHEDHIGAVPYLWSKLRCPVYCTRFTAEVLKKKLVEQ
GLLHRVKIIVPETGERLQIGTFNVQWLALTHSVPDPNALMIRTPAGNIFHTGDWKLDPEP
MVGHGYRQDTFTQLATEGVRAMVCDSTNATVNGHSASEGELYEGLRHYIETAPGRVIVTC
FGSNIARLLTLSHVADDTGRYMGLYGRSMVTMFQCAKRAGVWPYSAGTVDTGHLGYLPRH
EVLAVATGSQGEPRTALRRLAAGTHPDFDLEPGDRVIFSARAIPGNEDSIAGLIRQLESR
GVEVITAEMAIKPIHASGHPAQQELETLYRWVQPQIAIPVHGEAVHMQAHAELAKACGVP
RILTGRNGDLFMLSNNPGIQRQKVQTGRLGWDKGKLVRVD
NT seq 1383 nt   +upstreamnt  +downstreamnt
atgactccttctgagcgcgatctgttctttctgccgttaggcggcaccggtgagatcggc
atgaacatgaatctgtacggccacgatggccagtggctgatggtggactgcggtgtgacc
ttcccgcgtcccggccgcgttgtagcggatggttcggtgcatcaggccggagagccagat
attcagatggctgatccggattttatcgtccgccaccgtgaccagctggccgggctgatt
attacccacgcccacgaagatcatatcggggccgtgccttacctgtggtctaagttacgt
tgcccggtgtattgcacgcggttcaccgccgaagtgctgaagaagaaactggtcgaacag
ggcttgctgcaccgggtaaaaatcatcgtgcccgagaccggcgagcgcctgcagattggc
acgttcaatgtgcaatggctggcgctgacgcattcagtccccgaccccaacgcgctgatg
atccgcactccggccggtaatattttccacaccggcgactggaaactcgaccccgagccg
atggtcgggcatggctaccggcaagacacctttacccaactggccacggaaggtgtgcgc
gccatggtgtgtgattccaccaacgccacggtgaatggtcactctgcttccgaaggcgag
ctgtacgaaggcctgcgccattacattgaaaccgcaccggggcgggtgattgttacctgt
ttcggcagcaacatcgcccgcctgttaaccctgtcccatgtggcggacgataccggccgt
tatatgggcctgtacggtcgttcgatggtgaccatgttccagtgcgccaagcgcgctgga
gtctggccctacagtgccggcaccgtggacaccgggcacctggggtatttaccacgccat
gaagtgctggccgtggccaccggcagtcagggcgaaccgcgcacagcactgcgccggctg
gccgctggcacgcatcccgattttgatctggaacccggcgaccgggtgattttcagcgcc
cgcgccattccgggcaacgaagactccattgccgggctgatccggcagctggaaagccgc
ggcgtggaagtaatcaccgccgaaatggcgattaagcccattcacgcctccgggcatccg
gcccagcaagagctggaaaccctgtaccgctgggtacagccgcagattgccattccggta
catggcgaagccgtgcacatgcaggcccatgcagaattggcgaaagcctgcggcgtgccg
cgcatcctgaccggacggaacggcgacctgtttatgctcagtaataatcccggcattcag
cgccagaaagtacagaccggccggctcggctgggacaagggtaagctggtgcgggttgat
tga

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