Venatoribacter cucullus: GJQ55_12500
Help
Entry
GJQ55_12500 CDS
T07641
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
vcw
Venatoribacter cucullus
Pathway
vcw00300
Lysine biosynthesis
vcw00470
D-Amino acid metabolism
vcw01100
Metabolic pathways
vcw01110
Biosynthesis of secondary metabolites
vcw01120
Microbial metabolism in diverse environments
vcw01230
Biosynthesis of amino acids
Module
vcw_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
vcw00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GJQ55_12500 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GJQ55_12500 (lysA)
Enzymes [BR:
vcw01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
GJQ55_12500 (lysA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QQD25242
UniProt:
A0A9X7YQQ1
LinkDB
All DBs
Position
2667307..2668560
Genome browser
AA seq
417 aa
AA seq
DB search
MSIFSYQNGVLHAEQVSLAALAEHYGTPLYVYSRAALEQHFRAYTDALGDWPHLVCYAVK
ANSNIAVLNVLARQGAGFDIVSLGELERVLAAGGEPHKIVFSGVGKQAAEMARALDVGVY
CFNVESEAELERLSSVAVQLGKTAHISLRVNPDVDAQTHPYISTGLKENKFGIDINDAPR
VYAKAASLPGLVIKGVDCHIGSQLTEIRPFLDALERVLALVDNLAAQGISIEHLDLGGGL
GVQYRDEQPASAGDYIAAVKARVGERRFKLIFEPGRSIAANAGVFLTRVEYLKLNEHKNF
AIIDGAMNDLIRPALYSAWQDIRPLQQHSDAPRRSYDLVGPVCETGDFLGKNRELALAEG
DVLAVMSAGAYGFVMASNYNTRGRAAEVMVDGAQHHLVRERESIASLFANETLLPSD
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgtcgattttcagttaccagaatggcgtgttacacgccgaacaggtgtcactggccgcg
ctggctgaacactatggcacgccgctgtatgtgtattcccgcgccgcgctggaacagcat
ttccgcgcctataccgacgcgctgggcgactggccgcatctggtgtgttacgcggtaaaa
gccaactccaatattgccgtgctgaacgtgctggcccgtcagggcgccggcttcgatatc
gtcagcctgggcgaactggagcgggtgctggccgccggcggcgagccgcacaaaatcgtc
ttttccggcgttggtaagcaagccgcggaaatggcccgcgcgctggacgtgggcgtgtac
tgctttaacgtcgagtccgaagccgaactggaacgcctgagcagcgttgccgtacagctg
ggcaaaaccgcgcacatttccctgcgcgttaacccggacgtggacgcccagactcacccg
tacatttccaccggcctgaaagaaaacaaattcggcatcgatattaacgatgccccgcgc
gtgtacgccaaagccgccagcctgccggggctggtgattaaaggcgtggactgccacatc
ggcagccagctgaccgaaatccgcccgttccttgatgcgctggagcgcgtgctggcactg
gtcgacaacctggccgcacagggtatcagcattgagcatctggatctgggcggtggcctg
ggcgtgcaataccgtgatgaacaaccggccagcgccggcgactacattgccgccgtgaaa
gcccgcgtgggcgaacgccgcttcaaactgatttttgagccgggccgctccattgccgcc
aacgccggtgtgttcctcacccgggtggaatacctgaagctgaacgagcacaaaaatttc
gccatcatcgacggcgccatgaacgacctgatccgcccggccctgtacagcgcctggcag
gatatccgcccgctgcaacagcacagcgatgccccgcgccgcagctatgacctggtcggc
ccggtgtgcgaaaccggcgacttcctcggcaaaaaccgcgagctggcactggccgaaggc
gatgtactggcggtgatgtcggccggtgcttacggttttgtgatggcctccaattacaac
acccgcggccgtgccgccgaggtgatggtggatggcgcgcagcatcatctggtgcgcgag
cgcgaaagcatcgccagcctgttcgccaacgaaacccttctgccctctgactga
DBGET
integrated database retrieval system