KEGG   Venatoribacter cucullus: GJQ55_12535
Entry
GJQ55_12535       CDS       T07641                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K11927  ATP-dependent RNA helicase RhlE [EC:5.6.2.7]
Organism
vcw  Venatoribacter cucullus
Pathway
vcw03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:vcw00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    GJQ55_12535
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:vcw03019]
    GJQ55_12535
Enzymes [BR:vcw01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     GJQ55_12535
Messenger RNA biogenesis [BR:vcw03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     GJQ55_12535
SSDB
Motif
Pfam: DEAD Helicase_C ResIII CMS1 AAA_22
Other DBs
NCBI-ProteinID: QQD25249
UniProt: A0A9X7V409
LinkDB
Position
2673085..2674326
AA seq 413 aa
MTFASLGLHEPLLATLHALNYQQPTAVQQAAIPAILAGRDVLAGAQTGTGKTAAFLLPKL
QQLLNQPAASAGQPLLLVVAPTRELAQQVADSAQRYGAGSRLRTGVAYGGVSLRPQIQAL
QEGLEILIATPGRLLDLINQQALTLSAVQTLVLDEADRMLDLGFSDEIRALLKLLPAQRQ
TLFFSATFPKAVKDLAYSLLRDPQLIEVTPENSTVDSIKQTLYQLDKKRKAAALAYLIGA
GNWQQVLVFVRTKQGADALVKELALDGIKADSLHGDKSQGARQRALDDFKAGAIRALIAT
DVAARGIDIVSLPHVVNYELPFNAEDYVHRIGRTGRAGNDGHAISLVSRDEENLLAGIEQ
LIKRPLPMIWLTGFEPAFDEDLSRNGNPRKARAKAKAKAKAQAVYGIRKTKKQ
NT seq 1242 nt   +upstreamnt  +downstreamnt
atgacctttgcttctctgggattgcacgagccgttgctcgccaccctgcatgcgcttaat
tatcagcaacccactgccgtgcaacaggcggcgattccggccattctggccgggcgggat
gtgctggccggcgcccagaccggcaccggaaaaaccgccgcgtttctgctgcccaagttg
cagcagttgttaaatcagccggcagcctctgccggacagcctttattactggtggtcgca
cccacccgggaactggcccagcaggtcgccgacagtgcgcaacgctacggcgctggcagc
cgattacgcaccggcgtggcctatggcggcgtcagcctgcggccgcaaattcaggcatta
caggaagggctggaaattctgatcgccacccccggtcgcttgctcgacttaatcaaccag
caggcgctgaccctcagtgctgtgcaaaccctggtactggacgaagccgaccgtatgctc
gacctgggtttcagcgatgaaatccgcgccctgctgaaattgctgccggcccagcgacaa
acgctgtttttttccgccacctttcccaaagcggtgaaagacctggcctacagcctgctg
cgtgacccgcaactgattgaagtaacaccggaaaacagcaccgtcgacagcattaaacaa
acgctgtatcagctggataaaaagcgcaaagccgccgcactggcctatctgatcggcgcc
ggcaactggcagcaggtgctggtgtttgtgcgcaccaagcaaggcgccgatgcgctggta
aaagagctggcgctggacggcattaaagccgattcattgcacggcgataaaagccagggc
gcccgccagcgcgcgctggacgatttcaaagccggtgccatccgcgccctgatcgccacc
gatgtcgccgcccgcggtatcgacattgtgtcgctgccccatgtggtgaactatgaactg
ccattcaatgccgaagactacgtgcaccgcattggccgcaccggccgcgccggtaacgat
ggtcacgccatcagcctggtcagccgcgatgaagaaaacttactggccggtatcgaacag
ctgattaaacggccgctgccgatgatctggctgaccggttttgaaccagccttcgacgaa
gacctgagccgtaacggcaacccgcgtaaagcgcgcgccaaagccaaagcgaaggccaaa
gcgcaggcggtgtacggtatccgcaaaacgaaaaaacaatag

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