Venatoribacter cucullus: GJQ55_12790
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Entry
GJQ55_12790 CDS
T07641
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
vcw
Venatoribacter cucullus
Pathway
vcw03030
DNA replication
vcw03410
Base excision repair
vcw03420
Nucleotide excision repair
vcw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vcw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GJQ55_12790 (polA)
03410 Base excision repair
GJQ55_12790 (polA)
03420 Nucleotide excision repair
GJQ55_12790 (polA)
03440 Homologous recombination
GJQ55_12790 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vcw03032
]
GJQ55_12790 (polA)
03400 DNA repair and recombination proteins [BR:
vcw03400
]
GJQ55_12790 (polA)
Enzymes [BR:
vcw01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GJQ55_12790 (polA)
DNA replication proteins [BR:
vcw03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
GJQ55_12790 (polA)
DNA repair and recombination proteins [BR:
vcw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
GJQ55_12790 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GJQ55_12790 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
NYN_YacP
HHH_5
Motif
Other DBs
NCBI-ProteinID:
QQD25298
UniProt:
A0A9X7V0G0
LinkDB
All DBs
Position
2722384..2725167
Genome browser
AA seq
927 aa
AA seq
DB search
MSRPVVLVDGSSYLFRAFHAIPLLTNSKGLHTNAVKGVISMIRKLQKDFTDSQLVVVFDA
KGKTFRNDIYPEYKAHRPPMPDELREQIEPIHDIIRAMGLPLLIIDGVEADDVIGTLANQ
AIQHNQEVVISTGDKDMAQLVNSHVSLINTMTDTRLDEAGVQEKFGVPPQHIVDYLALMG
DKVDNIPGVPKVGEKTAVGLVAGLGSLEDIYANLDKVATLDFRGAKTLAPRLEEHKDDAF
LSKTLATIKCDVTLDFSLPDIKSSAADNDQLLALFQAMEFKAWIAELSNPTDSSKDSAPA
FELTASAGPASAAAKPAPAAPAVSDVQYDIILEQAGLERWISVLKKAELFAFDTETTALN
YKEALLVGLSFAVEPGKAAYVPLAHDYDGAPAQLNREAVLEQLRPLLESEQHKKVGQHMK
YDMHILANHGIALRGVQFDTMLESYVLDSVASRHDMDSLALKYLGHKTTSFEDIAGKGAK
QLTFNKITVEVAGPYAAEDADITLRLHQHLWPQLQQTPELAGVFTEIEMPVMPILCAMEE
QGALIDADLLHEQSQQIEQRLQQLEQEAHNVAGQVFNLGSPKQLGEILFEKLQLPVRKKT
PKGVPSTAEEVLQELADEGHELPSLLMEHRGLAKLKNTYTDKLPTMIAASTGRVHTSYHQ
AVAATGRLSSTDPNLQNIPIRSEEGRKIRQAFIAAPGCKLVAADYSQIELRIMAHLSGDQ
SLLTAFAEGRDIHRHTAAEVFGVPEQDVTDNQRRAAKAINFGLIYGMSAFGLAKQIGCSR
SEAQEYVNLYFQRYPGVRDYMDNTREQAKDKGYVETIFGRRLYLPEIRSSNAPRRQHAER
TAINAPMQGTAADIIKRAMIRVQGWLQTAGYDARMLMQVHDELVFEVAAAQAEDFATAVR
TEMEQAATLNVPLVVEAGIGDNWEQAH
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggcctgtcgttcttgtagacggttcttcttacctgttccgcgcctttcatgcc
attccgttgctgaccaactccaaaggtctgcacaccaatgcggtgaagggcgtgatcagc
atgatccgcaaactgcagaaagactttaccgattcccaactggtggtggtattcgatgcc
aagggcaaaaccttccgcaacgatatttacccggaatacaaagcgcatcgtccgcccatg
ccggacgaactgcgcgaacagattgaacccattcacgacattatccgcgccatgggttta
ccgctgctgattatcgacggcgtggaagctgatgacgtaatcggcacgctggccaatcag
gcgattcagcacaatcaggaagtggtgatttccaccggcgataaagacatggcacagctg
gtgaattcccatgtatcactgatcaataccatgaccgatacccgtctggacgaggctggc
gtacaggaaaaattcggcgtgccaccgcagcacatcgtcgattatttagccttaatgggc
gacaaggtcgataacattcccggcgtgccgaaagtgggtgaaaaaaccgccgtcgggtta
gtggcgggcttaggcagtcttgaggatatttacgccaatctggataaggtggcgacgctg
gatttccgtggcgccaaaacccttgcgccgcgattggaagaacataaagacgacgccttt
ttatccaaaaccctggcaacgattaaatgcgatgtgacattggatttttccctgccggat
attaaaagcagcgcggccgacaacgaccagctgctggccttatttcaggcgatggaattc
aaagcctggattgccgagctcagtaacccgactgacagcagtaaagacagcgccccggcg
tttgaattaaccgcctccgccggccctgccagtgccgccgcaaaaccggccccggccgct
cctgccgtaagcgatgttcagtacgatattattctcgaacaggctgggctggagcgctgg
atcagtgtgctgaaaaaagctgaactcttcgcgttcgataccgaaaccaccgcgctcaat
tacaaagaagcgcttctggtgggtttatcctttgccgttgaaccgggcaaagccgcctat
gtgccgttggcgcatgattacgacggtgccccggcgcaattaaaccgcgaagccgtgctg
gaacaactgcggccgttgctggaaagtgagcagcacaaaaaagtcggtcagcacatgaaa
tacgacatgcacattctggccaaccatggcattgccctgcgcggcgtgcagttcgacacc
atgctggaatcctatgtgctcgattccgttgccagccgtcacgacatggacagcttagcg
ctgaaatatctgggccataaaaccaccagttttgaagacattgccggcaaaggtgccaag
caactgaccttcaataaaatcaccgttgaggtggccggcccctacgccgccgaagatgcc
gatatcaccctgcgtctgcatcagcatttatggccgcaattacagcaaacgccggaactg
gccggggtgtttaccgagattgaaatgccggtaatgcccattttgtgcgccatggaagaa
cagggcgccttaattgatgccgatttactgcacgagcaaagccagcagattgaacagcgc
ctgcaacaattagagcaggaagcgcacaatgtggccggccaggtatttaatctgggttca
cccaaacaactaggcgaaattctgtttgaaaaactgcagctgccggtacgcaaaaaaacc
ccgaaaggcgtgccttctaccgctgaagaagtgttgcaggaactggccgatgaaggccat
gaattacccagcctgttaatggaacatcgtggtctggcgaaattaaaaaatacctacacc
gataagctgccgaccatgatcgccgccagcactggccgcgtacacacctcgtaccatcag
gccgtggcagcgacgggccgcttgtcgtctaccgatccgaatttacagaatattcccatc
cgctcggaagaaggccgcaagatccggcaggcctttattgccgcccccggctgcaaactg
gtggctgccgactacagccagattgagctgcggattatggcgcatttatccggcgaccag
agcttattaaccgcctttgctgaaggccgcgatattcatcgtcataccgccgccgaagtt
ttcggcgtaccagagcaggacgttaccgataaccagcgccgcgctgccaaagccattaac
ttcggtctgatttatggcatgtcggcctttggtctggccaaacaaattggctgcagccgg
agtgaggcgcaggaatatgtgaacctgtatttccagcgctacccgggcgtacgcgactat
atggacaacacccgcgagcaggccaaagacaaaggctatgtcgaaaccattttcggccgc
cgcttgtatttaccggaaatccgcagcagcaatgccccgcgtcgtcagcacgccgaacgc
acggccattaacgcgcccatgcagggcacggcggccgatattattaagcgcgcgatgatc
cgtgtgcagggctggctgcaaaccgccggttatgatgcgcgcatgctgatgcaggtacac
gacgaactggtgtttgaagtggccgccgctcaagccgaagattttgccacagcggtacgc
actgaaatggaacaagccgccacgctcaatgtacccttggtggtggaagcaggcattggt
gataactgggagcaagctcactaa
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