Vibrio cholerae O49 1154-74: VAA049_1053
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Entry
VAA049_1053 CDS
T03828
Name
(GenBank) bacterial regulatory, Fis family protein
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
vcx
Vibrio cholerae O49 1154-74
Brite
KEGG Orthology (KO) [BR:
vcx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcx03000
]
VAA049_1053
Transcription factors [BR:
vcx03000
]
Prokaryotic type
Helix-turn-helix
Other families
VAA049_1053
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
GAF
Sigma54_activ_2
HTH_8
AAA_2
AAA_5
HTH_30
AAA
PAS_4
Mg_chelatase
nSTAND6
MCM
HTH_7
Phage-MuB_C
AAA_19
HTH_29
HTH_23
HTH_28
AAA_3
HTH_Tnp_ISL3
HTH_17
Motif
Other DBs
NCBI-ProteinID:
AKB04725
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Position
1133431..1135191
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AA seq
586 aa
AA seq
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MQLQQLSHVNWLVNSWQRSEQAGLTQQSRAQDIRLSDNKLKERRQELAGLIDTVSRFALP
LFYQLFAHSDSRLILTDQHGVIIGSWGQARFREKLSQIALSSGACWQEPIKGTNAIGTAL
IEQKPISVIGEQHFIQHHHFISCSASPIFDYTGQLIGVLDITSEQQKHTLSTQVVVQNMV
QLVENQLLNQIPHGHVRIDLACEPSLLSSGWQGVIIADESGQILAHNQVAGQLLAQGRVI
GQSVEQVLPRPQTHASFIYTTTPLHSKQHRTRALTPASDLHFGDAEMERCWQQANRVIDK
DIRLLILGQTGVGKNEFVKALHKNSQRKNGPLVAVNCGALAKELVEAELFGYIAGAFTGA
SHKGYQGKVRLADKGILFLDEIADLPLDAQSRLLHVLQDKTVLPVGSNHATKVDIQIIAA
THKNLEQMVTQGMFRQDLYYRLSDLVVELPSFQQRQDRQALIHHIHRRYSDAGQQICGDL
MQRLLAYHWPGNLRELDSLIKVASLMAEGEGVLTFNHLPTHLAQKLSHAAPIAAEDDQQK
DIKSTVEASLLKTYQATQGNISQTSRLLGLSRNTIYRKLKALGILK
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgcaacttcaacagcttagccatgttaattggctggtgaactcttggcagcgtagtgaa
caggcggggttgacccagcagagtcgtgcgcaagatattcgcttgagtgacaacaaactt
aaggagcgtcgccaagagctcgcggggctgattgacacggtcagccgatttgcactaccg
ctgttctaccaactgtttgcacacagtgacagccgtttaattttgaccgaccaacacggc
gtgatcatcggcagttgggggcaagcgagatttcgtgaaaaactgagccaaatcgcgcta
agctccggcgcatgttggcaagagccgatcaaaggtaccaacgctattggcacggctttg
attgagcaaaagccaatttcggtgattggtgagcagcactttattcagcatcatcacttt
atcagttgttccgcgagcccgatttttgattacactggacagctgatcggagtgttagac
atcaccagcgagcagcagaaacacacgctttcaacccaagttgtagtgcaaaacatggta
caactggttgaaaatcagctccttaaccagataccacatggccatgtacgaatcgatctc
gcctgtgaaccttcgttactgagtagtggctggcaaggcgtaattattgcggatgaatcg
ggtcagatattggcgcataaccaagtcgcaggtcagttattagcgcaaggcagagtgatt
ggtcaatcggtggagcaggtgctgccacggccacagacgcatgcatcatttatctatacc
accacaccgctccactccaagcaacatcgtacccgtgcgttaacccccgccagtgatctg
cattttggggatgcggagatggagcgctgttggcaacaggctaatcgggtaattgataaa
gatatccgcttgctgatccttggccaaactggggtgggtaaaaatgaatttgttaaagcg
ctgcacaaaaatagccagcgtaaaaacggccctttagtcgcggtaaattgtggtgcactg
gcaaaagagttggtggaggcagagctgtttggttatatcgctggcgcctttaccggagcc
agtcataaaggttaccaagggaaagtgcgtttagccgacaaaggtattctgtttctggat
gaaatcgccgatttacccctagatgcgcaaagtcgcttactgcatgtgttgcaagataaa
accgtgctgccggtgggttctaatcacgccaccaaagtcgatattcagattatcgctgcg
actcacaaaaaccttgaacagatggtcacacaagggatgtttcgccaagatctctactac
cgactcagtgatttggttgtcgagctgcccagcttccagcagcgtcaagatagacaagcc
ctgatccaccatattcatcgccgctacagtgatgctggccaacaaatttgtggtgactta
atgcaaaggctactcgcttatcactggcccggtaatttacgcgagctagatagcctaatc
aaagtcgcgagtttgatggccgaaggcgagggggtactcactttcaatcatctgccgaca
catcttgcccaaaaactcagccacgcagcgcctatcgctgcggaggatgatcaacagaaa
gacatcaaatccacggtagaagcatccttactcaaaacctaccaagcaacgcaaggcaac
attagccaaacctcgcgtttgcttgggctgagcagaaataccatctatcgcaaattgaaa
gcgctggggatactgaagtaa
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