Vibrio cholerae O49 1154-74: VAA049_1151
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Entry
VAA049_1151 CDS
T03828
Name
(GenBank) bacterial regulatory s, luxR family protein
KO
K13246
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
vcx
Vibrio cholerae O49 1154-74
Pathway
vcx05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
vcx00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VAA049_1151
Enzymes [BR:
vcx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
VAA049_1151
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GFIT
Motif
Pfam:
EAL
Response_reg
GerE
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
Terminase_5
Motif
Other DBs
NCBI-ProteinID:
AKB02548
UniProt:
A0A5Q6PNV2
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All DBs
Position
1247028..1248782
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AA seq
584 aa
AA seq
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MKIMIVEDDRIQATSLKLKLRQLGLDDVILAENGFAALELCNKVGIDLMFCDIRMPQMDG
ISLLSQLSLQAPKLGVVILSAVEDTILELTHNMCSLAGFAYVDRLPKPYEVEDLQRVVEG
FQKQTEPETSHKPAITLTCDEIEQAFLHDHIFNYYQPQFDFRSGAMVGVEALVRYEHPTH
GMLSPTVFLPLIEQCGLHEKLFLTVLEKSVSALASIGADLQLSVNISQRNLQHSICDPIL
AICERYGFPASKLTLEMTEHEVYNGTPTSLANLARLRMYGVGLSIDDFGTGYASLGQLAQ
LPFTELKIDRSFVHDLATNYKHQQLTNMCLLLAQSLGLHCVVEGVENEETWQYLRQLGVD
TCQGYYAAKPMPIAQLSELYTKNRRQCLGCQSMDDGWQILLVDNHMLSATALQKVLNKEE
NVSKVFVAQDIEQTLHKLRDLPINLLVVESRFLSTISPAAFHELLEPYYRGAILVLHDGL
TAEIQQDEPKAIVVKANTLMETSSRILQQAQQSTVRPQAQQEDLAQLSERELTVAKMLVE
GLTNKEIALQLEINQKTVSTYKTRIMTKLGIKSAMELVRFVTLK
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgaaaataatgatagtagaagatgatcgaattcaggcgacgagcctgaagctcaagcta
agacagcttgggttggatgacgtcatcttggctgaaaacggatttgctgccttagaactg
tgtaacaaagtgggtatcgatttgatgttttgcgatattcgaatgccgcagatggatggg
atcagtttgttatcacaactgagtttacaggcacctaagctaggtgtggtgatactcagc
gcggtggaagatacgattcttgagttaacccacaacatgtgtagtttggcgggatttgct
tatgttgatcgcctacctaagccctacgaagtggaggatttacagcgtgttgtcgagggg
tttcaaaagcaaacggagcccgaaaccagccacaaacctgcaatcacgctaacctgtgac
gagattgaacaagcttttttgcacgatcatatttttaattattatcaaccacagtttgat
tttcgcagtggggcgatggtcggcgttgaagcgctagtacgttacgagcacccaactcat
ggcatgttaagcccaacagtgtttctgcctttaattgagcagtgtggcttgcatgagaaa
ctcttccttaccgtattagaaaagtcggtctctgcactggccagtattggtgctgacttg
cagctttccgtcaacatcagccagcgcaacttgcaacactcaatctgtgatcccattctc
gccatctgtgagcggtatggctttcccgcaagcaaactgactctagagatgacagaacat
gaagtatacaacggaaccccgacctcattggccaaccttgctcgactgcgaatgtatggc
gttgggctatcgattgatgattttggtacgggttacgcgtcattaggtcaactggctcaa
ctgccttttacggaactcaagattgatcgcagctttgtgcatgacttggcaaccaactac
aaacaccaacaattgaccaatatgtgtttgttgctggctcaatctttggggttgcactgc
gtcgtcgaaggggtagagaacgaagaaacatggcaatacttacgtcaacttggggtagat
acttgccaaggttactacgcggctaagcccatgccgattgctcagttgagcgagctttac
actaaaaatcgtcgtcagtgtttaggttgtcaaagcatggatgatggctggcaaatcttg
ctggtggataaccatatgctcagcgccacggcattacaaaaagtgctcaataaagaagag
aatgtcagcaaggtgtttgtggcacaagatattgagcagacgctgcacaaactgcgcgat
ttaccgatcaacctgctggtcgtcgaaagtcggtttttatcgacaatcagtcctgcggca
tttcacgagttgcttgagccttactatcgaggggcgatcttggtgctgcatgatggatta
accgctgaaattcaacaggatgagcccaaagccatcgtcgtcaaagcgaatactttgatg
gaaaccagttctcggatcttacagcaagcgcagcagagcactgtgcgcccacaggcgcaa
caagaagatcttgctcagctttctgagcgagagttgacggttgcgaaaatgttagtagaa
gggctgacaaataaggaaatcgccctacaactcgaaatcaatcaaaaaaccgtaagcact
tacaagactaggattatgaccaagttagggattaaatcggccatggaattggtgcgtttt
gtaacattaaaatag
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