Vibrio cholerae O49 1154-74: VAA049_1183
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Entry
VAA049_1183 CDS
T03828
Name
(GenBank) calx-beta domain protein
Organism
vcx
Vibrio cholerae O49 1154-74
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_CELSR2_9th
Calx-beta
Motif
Other DBs
NCBI-ProteinID:
AKB04706
LinkDB
All DBs
Position
1289486..1297507
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AA seq
2673 aa
AA seq
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MGIHALLSLTNLAANQLLVIDKNGNIAIINAGETVPEGAIILDPNSNNLMPEQEPLPVAQ
LVDAEGNAQPITDDIEQILAALEEGADPTALDDDLAPAAGGLQGSSITGSASIERDGAET
IASTQFDTSGFEAIGLSRTQSLSLLNLLQAPTAPITPIPPVDPEEPVSPIVISSITGDNA
AEGSNNTFSVSLSGTTAAETTIVLTLAGDTATKGVDFNGTSVIVVINGVSQTVPVNEDGT
FQVTVPTNTNSFSVQVSTIDDNIYEGNETFTLSGAGTNSIVTGTATITDDGSNGGTDDRP
AVSGISSPTVSEGESATFDVSLSNASTTATTVTLTLAGGSATAGTDFTSTEVTITYQDGS
TQTVTVNDDGSFSVDVPANTTTFSVSVQTTDDNVYEGGESFTLSGKTATQGTAITTTGTI
VDNDEVPTIKSIGTGDVTATEGDALIFTVKLSNVSSTSTSFDFLLQDGTATSDDYGAASF
SNGVTYDASTGKITVPTGVTSFTVNVPTTNDSIEEADETVKLTIGGKEAIGTIVDNDNAP
VIDDATVNNLSESIANGTEVYDVQEARTGNDTDLDGEALQYTFVHSNNTRSTTSEDGAFS
IDPGTGKITVLDTTKLDYESATSIVLKVETTDGVNKDTADITLNLTNVNDSDTVFTKESE
TFNYAEGTAAGVTLGKVTATDADGDSISYSIAQEHNVYAADDVNKERPFYQVDANGNVSL
TEAGEKAFTNDYESGRNTHTITVTATGTDGSGADTTDTIEVTLNETNIDDNAPKFEGTTD
GEYSFSYDENSAADTVLGTVKATDADKETVTYSIKSGNDNGWFAIDATTGVITLTAKGAE
AAANDFEALANVHSLVVTATEDAGLGGVKTTDITVKLNEQNLDDNAPKFEGTTDGEYSFS
YDENSAADTVLGTVKATDADKETVTYSIKSGNDNGWFAINATTGVITLTAKGAEAAANDF
EALANVHSLVVTATEDAGLGGVKTTDITVKLNEQNLDDNAPKFEGTTDGEYSFSYDENSA
ADTVLGTVKATDADKETVTYSIKSGNDNGWFAINATTGVITLTAKGAEAAANDFEALANV
HSLVVTATEDAGLGGVKTTDITVKLNEQNLDDNAPKFEGTTDGEYSFSYDENSAADTVLG
TVKATDADKETVTYSIKSGNDNGWFAIDATTGVITLTAKGAEAAANDFEALANVHSLVVT
ATEDAGLGGVKTTDITVKLNEQNLDDNAPKFEGTTDGEYSFSYDENSAADTVLGTVKATD
ADKETVTYSIKSGNDNGWFAINATTGVITLTAKGAEAAANDFEALANVHSLVVTATEDAG
LGGVKTTDITVKLNEQNLDDNAPKFEGTTDGEYSFSYDENSAADTVLGTVKATDADKETV
TYSIKSGNDNGWFAIDATTGVITLTAKGAEAAANDFEALANVHSLVVTATEDAGLGEVKH
TDITVRLNEQNLDDNKPVFEGTSTEGGYSFSYNEGRLAGTTLGTVTAVDADNEKVTYSIT
SGNTNGWFAINPDTGAITLTQQGQDAEANDFERLINEHRLQVTATEVTGLGEVKKTIVNV
TLTELNIDDNAPKFEGTTDGEYSFSYDENSAADTVLGTVKATDADKETVTYSIKSGNDNG
WFAIDATTGVITLTAKGAEAAANDFEALANVHSLVVTATEDAGLGEVKHTDITVRLNEQN
LDDNKPVFEGTSTEGGYSFSYNEGRLAGTTLGTVTAVDADNEKVTYSITSGNTNGWFAIN
PDTGAITLTQQGQDAEANDFERLINEHRLQVTATEVTGLGEVKKTIVNVTLTELNIDDNA
PKFEGTTDGEYSFSYDENSAADTVLGTVKATDADKETVTYSIKSGNDNGWFAIDATTGVI
TLTAKGAEAAANDFEALANVHSLVVTATEDAGLGGVKTTDITVKLNEQNLDDNAPKFEGT
TDGEYSFSYDENSAADTVLGTVKATDADKETVTYSIKSGNDNGWFAIDATTGVITLTAKG
AEAAANDFEALANVHSLVVTATEDAGLGGVKTTDITVKLNEQNLDDNAPKFEGTTDGEYS
FSYDENSAADTVLGTVKATDADKETVTYSIKSGNDNGWFAIDATTGVITLTAKGAEAAAN
DFEALANVHSLVVTATEDAGLGGVKTTDITVKLNEQNLDDNAPKFEGTTDGEYSFSYDEN
SAADTVLGTVKATDADKETVTYSIKSGNDNGWFAINATTGVITLTAKGAEAAANDFEALA
NVHSLVVTATEDAGLGGVKTTDITVKLNEQNLDDNAPKFEGTTDGEYSFSYDENSAADTV
LGTVKATDADKETVTYSIKSGNDNGWFAIDATTGVITLTAKGAEAAANDFEALANVHSLV
VTATEDAGLGEVKHTDITVRLNEQNLDDNKPVFEGTSTEGGYSFSYNEGRLAGTTLGTVT
AVDADNEKVTYSITSGNTNGWFAINPDTGAITLTQQGQDAEANDFERLINEHRLQVTATE
VTGLGEVKKTIVNVTLTELNIDDNAPKFEGTTDGEYSFSYDENSAADTVLGTVKATDADK
ETVTYSIKSGNDNGWFAIDATTGVITLTAKGAEAAANDFEALANVHSLVVTVTEDAGLGE
VKHTDITVRLNEQNLDDNKPVFEGTSTEGGYSFSYNEGRLAGTTLGTVTAVDADNEKVTY
SITSGNTNGWFAINPDTGAITLTQQGQGMPKAK
NT seq
8022 nt
NT seq
+upstream
nt +downstream
nt
atgggaattcatgctttgttgtctttaacaaatctagcagcaaatcagctgctcgtgatt
gataaaaacggaaatatcgcgatcatcaacgctggagagacggttcctgaaggtgcgatt
atcctcgacccgaatagtaacaatttgatgcctgagcaggagccactgcccgtagcacaa
ctggtggatgctgagggtaacgcccagccgattaccgacgatatagagcagattttagcc
gcattagaagaaggcgcagacccgactgcactagatgatgatctcgccccagcagcaggt
ggcctccaaggttcatccatcacgggtagcgcctcaattgagcgtgatggtgctgaaacc
atcgcgtcaacacaatttgatacatccggcttcgaagccattggcctatcaagaacgcaa
agcttgagtttgctaaacctattgcaagctcctacggctccaattacccctattcctcca
gttgatccagaagagcctgtctctcccattgtaattagcagtattacaggcgataacgca
gccgaaggtagcaacaataccttttccgtgagcctatcaggtactactgccgcggaaact
acaattgtgctgacactggctggtgacactgcgaccaaaggtgtcgatttcaatggtacg
tcagttattgtcgttattaatggtgtgagccagacagtgccagttaatgaagatggcacc
ttccaagtaacagtgccgaccaatacaaacagctttagcgttcaagtctctaccatagat
gacaatatctacgaaggaaatgagaccttcaccctaagtggtgcgggcacaaatagcata
gtcacaggcacagcgaccatcactgatgatggcagcaacggcggcacagacgatcgccca
gcggtatcgggcatcagcagcccaaccgtatcagaaggggaaagcgccacgtttgacgtt
agcttgagcaacgccagcacaacagcgaccaccgtcactttgacgttggcgggtggcagc
gcgacggcgggcacggacttcacgagtactgaagtgaccatcacctaccaagatggcagc
acccaaacggttacggtcaatgacgatggcagcttcagtgtggatgtgccagccaacacc
accacgttcagcgtctccgtccaaactactgacgataacgtatatgaagggggcgaaagc
ttcacactgagcggaaagaccgcgactcaagggacggcgattaccacgaccggaaccatc
gtcgacaacgacgaggtaccgaccatcaagtcgatcggcaccggcgacgtgaccgcgacc
gaaggcgacgcgctgatcttcacggtgaaactgagcaatgtcagtagcaccagcacgtcc
ttcgacttcctgctgcaagatggcaccgccacgtccgacgactacggtgcggccagcttc
agcaacggtgtgacctacgacgccagcaccggcaagatcaccgtgccgactggcgtgacc
agcttcaccgtcaacgtacctactaccaacgacagcatcgaggaagccgacgaaaccgtc
aagctgaccatcggtggcaaagaggcgatcggcaccatcgtcgataacgacaacgcgccg
gtcatcgacgacgcgaccgtgaataacttgtcagagagcatcgcgaacggcaccgaagtg
tacgacgtacaggaagcgcgcaccggcaacgacaccgacctcgatggtgaagcactgcaa
tacaccttcgtgcacagcaacaacacccgtagcactactagtgaagacggtgcgttcagc
atcgatccaggcaccggtaagatcaccgtgctggataccacgaagttggattacgagagt
gccacgtcaatcgtcctgaaagtcgaaacgactgacggcgtgaacaaagacactgcagac
atcacactcaacctgactaacgtcaacgacagtgacacggtcttcaccaaagagagtgag
acgttcaactatgcggaaggcacggcggcgggtgtaacgctgggcaaagtcacagcgacc
gacgccgatggcgacagcatcagttacagcatcgcgcaagagcacaacgtgtacgcggcg
gatgatgtgaataaagagcgtccgttctaccaggtggatgcgaacggcaatgtgagtctg
accgaggcgggtgagaaagcgttcaccaacgactacgagtctggccgaaacacgcacacc
atcacggtgacggcgacgggcacagacggttcgggcgcggacaccacagacaccatcgag
gtgacgctgaacgaaaccaacatcgatgacaacgcaccgaagtttgaaggcaccaccgac
ggtgagtacagcttcagctacgacgaaaacagcgcggcggacaccgtactgggcacggtc
aaggccaccgatgcggataaagagacggtgacctacagcatcaagtcaggcaacgacaac
ggctggtttgcgattgatgcgaccacgggcgtgatcaccctgactgcgaaaggtgcagag
gcggcggcgaacgactttgaggcgctggccaacgtgcacagcttggtggtgactgcgacc
gaagacgcaggtctggggggcgtgaagaccaccgacatcacagtcaagctcaacgagcag
aacctcgatgacaacgcaccgaagtttgaaggcaccaccgacggtgagtacagcttcagc
tacgacgaaaacagtgcggcggacaccgtactgggcacggtcaaggccaccgatgcggat
aaagagacggtgacctacagcatcaagtcaggcaacgacaacggctggtttgcgattaat
gcgaccacgggcgtgatcaccctgactgcgaaaggtgcagaggcggcggcgaatgacttt
gaggcgctggccaacgtgcacagcttggtggtgactgcgaccgaagacgcaggtctgggt
ggcgtgaagaccaccgacatcacagtcaagctcaacgagcagaacctcgatgacaacgca
ccgaagtttgaaggcaccaccgacggtgagtacagcttcagctacgacgaaaacagcgcg
gcggacaccgtactgggcacggtcaaggccaccgatgcggataaagagacggtgacctac
agcatcaagtcaggcaacgacaacggctggtttgcgattaatgcgaccacgggcgtgatc
accctgactgcgaaaggtgcagaggcggcggcgaatgactttgaggcgctggccaacgtg
cacagcttggtggtgactgcgaccgaagacgcaggtctgggtggcgtgaagaccaccgac
atcacagtcaagctcaacgagcagaacctcgatgacaacgcaccgaagtttgaaggcacc
accgacggtgagtacagcttcagctacgacgaaaacagcgcggcggacaccgtactgggc
acggtcaaggccaccgatgcggataaagagacggtgacctacagcatcaagtcaggcaac
gacaacggctggtttgcgattgatgcgaccacgggcgtgatcaccctgactgcgaaaggt
gcagaggcggcggcgaatgactttgaggcgctggccaacgtgcacagcttggtggtgact
gcgaccgaagacgcaggtctgggtggcgtgaagaccaccgacatcacagtcaagctcaac
gagcagaacctcgatgacaacgcaccgaagtttgaaggcaccaccgacggtgagtacagc
ttcagctacgacgaaaacagcgcggcggacaccgtactgggcacggtcaaggccaccgat
gcggataaagagacggtgacctacagcatcaagtcaggcaacgacaacggctggtttgcg
attaatgcgaccacgggcgtgatcaccctgactgcgaaaggtgcagaggcggcggcgaac
gactttgaggcgctggccaacgtacacagcttggtggtgactgcgaccgaagacgcaggt
ctgggtggcgtgaagaccaccgacatcacagtcaagctcaacgagcagaacctcgatgac
aacgcaccgaagtttgaaggcaccaccgacggtgagtacagcttcagctacgacgaaaac
agtgcggcggacaccgtactgggcacggtcaaggccaccgatgcggataaagagacggtg
acctacagcatcaagtcaggcaacgacaacggctggtttgcgattgatgcgaccacgggc
gtgatcaccctgactgcgaaaggtgcagaggcggcggcgaacgactttgaggcgctggcc
aacgtgcacagcttggtggtgactgcgaccgaagacgcggggctgggcgaggtgaaacat
accgacatcacagtcaggctcaacgagcaaaatctcgatgacaacaagccagtctttgaa
ggtacaagtacagagggtgggtatagctttagttataatgaaggtcgtttagcgggtact
acgctaggtactgtcacggcggttgatgctgacaacgagaaggttacctacagcatcact
tctggcaataccaatggttggtttgcgattaatccggacactggtgcgattacgttgacc
caacaaggtcaggatgccgaagccaatgattttgagcggttgatcaatgaacaccgcttg
caggtcactgcgacggaagtgactggcttaggtgaagttaaaaagaccatagtcaatgtg
accttgacggagttgaacattgatgacaacgcaccgaagtttgaaggcaccaccgacggt
gagtacagcttcagctacgacgaaaacagtgcggcggacaccgtactgggcacggtcaag
gccaccgatgcggataaagagacggtgacctacagcatcaagtcaggcaacgacaacggc
tggtttgcgattgatgcgaccacgggcgtgatcaccctgactgcgaaaggtgcagaggcg
gcggcgaacgactttgaggcgctggccaacgtgcacagcttggtggtgactgcgaccgaa
gacgcggggctgggcgaggtgaaacataccgacatcacagtcaggctcaacgagcaaaat
ctcgatgacaacaagccagtctttgaaggtacaagtacagagggtgggtatagctttagt
tataatgaaggtcgtttagcgggtactacgctaggtactgtcacggcggttgatgctgac
aacgagaaggttacctacagcatcacttctggcaataccaatggttggtttgcgattaat
ccggacactggtgcgattacgttgacccaacaaggtcaggatgccgaagccaatgatttt
gagcggttgatcaatgaacaccgcttgcaggtcactgcgacggaagtgactggcttaggt
gaagttaaaaagaccatagtcaatgtgaccttgacggagttgaacattgatgacaacgca
ccgaagtttgaaggcaccaccgacggtgagtacagcttcagctacgacgaaaacagcgcg
gcggacaccgtactgggcacggtcaaggccaccgatgcggataaagagacggtgacctac
agcatcaagtcaggcaacgacaacggctggtttgcgattgatgcgaccacgggcgtgatc
accctgactgcgaaaggtgcagaggcggcggcgaatgactttgaggcgctggccaacgtg
cacagcttggtggtgactgcgaccgaagacgcaggtctgggtggcgtgaagaccaccgac
atcacagtcaagctcaacgagcagaacctcgatgacaacgcaccgaagtttgaaggcacc
accgacggtgagtacagcttcagctacgacgaaaacagcgcggcggacaccgtacttggc
acggtcaaggccaccgatgcggataaagagacggtgacctacagcatcaagtcaggcaac
gacaacggctggtttgcgattgatgcgaccacgggcgtgatcaccctgactgcgaaaggt
gcagaggcggcggcgaacgactttgaggcgctggccaacgtgcacagcttggtggtgact
gcgaccgaagacgcaggtctgggtggcgtgaagaccaccgacatcacagtcaagctcaac
gagcagaacctcgatgacaacgcaccgaagtttgaaggcaccaccgacggtgagtacagc
ttcagctacgacgaaaacagcgcggcggacaccgtactgggcacggtcaaggccaccgat
gcggataaagagacggtgacctacagcatcaagtcaggcaacgacaacggctggtttgcg
attgatgcgaccacgggcgtgatcaccctgactgcgaaaggtgcagaggcggcggcgaat
gactttgaggcgctggccaacgtgcacagcttggtggtgactgcgaccgaagacgcaggt
ctgggtggcgtgaagaccaccgacatcacagtcaagctcaacgagcagaacctcgatgac
aacgcaccgaagtttgaaggcaccaccgacggtgagtacagcttcagctacgacgaaaac
agcgcggcggacaccgtactgggcacggtcaaggccaccgatgcggataaagagacggtg
acctacagcatcaagtcaggcaacgacaacggctggtttgcgattaatgcgaccacgggc
gtgatcaccctgactgcgaaaggtgcagaggcggcggcgaacgactttgaggcgctggcc
aacgtacacagcttggtggtgactgcgaccgaagacgcaggtctgggtggcgtgaagacc
accgacatcacagtcaagctcaacgagcagaacctcgatgacaacgcaccgaagtttgaa
ggcaccaccgacggtgagtacagcttcagctacgacgaaaacagtgcggcggacaccgta
ctgggcacggtcaaggccaccgatgcggataaagagacggtgacctacagcatcaagtca
ggcaacgacaacggctggtttgcgattgatgcgaccacgggcgtgatcaccctgactgcg
aaaggtgcagaggcggcggcgaacgactttgaggcgctggccaacgtgcacagcttggtg
gtgactgcgaccgaagacgcggggctgggcgaggtgaaacataccgacatcacagtcagg
ctcaacgagcaaaatctcgatgacaacaagccagtctttgaaggtacaagtacagagggt
gggtatagctttagttataatgaaggtcgtttagcgggtactacgctaggtactgtcacg
gcggttgatgctgacaacgagaaggttacctacagcatcacttctggcaataccaatggt
tggtttgcgattaatccggacactggtgcgattacgttgacccaacaaggtcaggatgcc
gaagccaatgattttgagcggttgatcaatgaacaccgcttgcaggtcactgcgacggaa
gtgactggcttaggtgaagttaaaaagaccatagtcaatgtgaccttgacggagttgaac
attgatgacaacgcaccgaagtttgaaggcaccaccgacggtgagtacagcttcagctac
gacgaaaacagtgcggcggacaccgtactgggcacggtcaaggccaccgatgcggataaa
gagacggtgacctacagcatcaagtcaggcaacgacaacggctggtttgcgattgatgcg
accacgggcgtgatcaccctgactgcgaaaggtgcagaggcggcggcgaacgactttgag
gcgctggccaacgtgcacagcttggtggtgactgtgaccgaagacgcggggctgggcgag
gtgaaacataccgacatcacagtcaggctcaacgagcaaaatctcgatgacaacaagcca
gtctttgaaggtacaagtacagagggtgggtatagctttagttataatgaaggtcgttta
gcgggtactacgctaggtactgtcacggcggttgatgctgacaacgagaaggttacctac
agcatcacttctggcaataccaatggttggtttgcgattaatccggacactggtgcgatt
acgttgacccaacaaggtcaaggaatgccgaaagccaaatga
DBGET
integrated database retrieval system
