KEGG   Vibrio cholerae O49 1154-74: VAA049_1503
Entry
VAA049_1503       CDS       T03828                                 
Name
(GenBank) exonuclease family protein
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
vcx  Vibrio cholerae O49 1154-74
Pathway
vcx03030  DNA replication
vcx03430  Mismatch repair
vcx03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:vcx00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    VAA049_1503
   03430 Mismatch repair
    VAA049_1503
   03440 Homologous recombination
    VAA049_1503
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:vcx03032]
    VAA049_1503
   03400 DNA repair and recombination proteins [BR:vcx03400]
    VAA049_1503
Enzymes [BR:vcx01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     VAA049_1503
DNA replication proteins [BR:vcx03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     VAA049_1503
DNA repair and recombination proteins [BR:vcx03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     VAA049_1503
SSDB
Motif
Pfam: RNase_T Rv2179c-like CAF1 RNase_H_2
Other DBs
NCBI-ProteinID: AKB02303
LinkDB
Position
1669677..1670378
AA seq 233 aa
MFDSAIYWPARFAHLAQQARQTHLQRFYAQPLVEGSTPIHQCSLVALDFETTGLNAEQDA
IVSIGLVPFTTQRIFLNQARYWLVKPSQPLEEGSIVFHGITHSELQHAQAPEQVLKELLE
ALYGKIVVVHFRHIEREFLRQISLNIWDEAIEFPVLDTLEIERQLLDKQRSLWQRITRRP
LPSIRLGQSRMRYHLPPYSPHHALTDAIATAELFQAQCAHHLPPHTAIQSLWL
NT seq 702 nt   +upstreamnt  +downstreamnt
atgttcgactctgcgatttactggcccgctcgatttgctcacttagcccagcaggctcgg
caaacccatttacagcgcttttatgctcaacctctggttgaaggctcaacaccgattcat
cagtgctcactggttgccctcgattttgaaacaacgggactgaatgccgagcaagatgcc
attgtgagtatcggtttagtgccttttactactcaacggatttttcttaatcaagctcgg
tattggttagtaaaaccctctcaaccgcttgaagaggggtcgatagtgttccatgggatc
acgcactccgagttgcagcatgcacaagctccagaacaggtattaaaggaattactcgag
gcgctgtacggcaagattgtcgtcgtacattttaggcatattgaacgtgaatttttgcgc
cagattagcctgaatatatgggacgaggcgatcgagtttcccgtgttggatacattagaa
attgaacgtcagttactggataagcaacgctcgctgtggcaacggattacacgtcgacct
ttaccctcaatacgccttgggcaatcacggatgcgttatcacttaccgccctactcacct
caccatgcgctgacggatgccattgcgaccgcagaactgtttcaagcgcagtgcgcgcac
catctcccaccccacactgccattcagtctctgtggctttag

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