Vibrio cholerae O49 1154-74: VAA049_1535
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Entry
VAA049_1535 CDS
T03828
Symbol
gyrA
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
vcx
Vibrio cholerae O49 1154-74
Brite
KEGG Orthology (KO) [BR:
vcx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vcx03032
]
VAA049_1535 (gyrA)
03400 DNA repair and recombination proteins [BR:
vcx03400
]
VAA049_1535 (gyrA)
Enzymes [BR:
vcx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
VAA049_1535 (gyrA)
DNA replication proteins [BR:
vcx03032
]
Prokaryotic type
DNA Topoisomerases
VAA049_1535 (gyrA)
DNA repair and recombination proteins [BR:
vcx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
VAA049_1535 (gyrA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
TPD52
Ins134_P3_kin_N
Motif
Other DBs
NCBI-ProteinID:
AKB04587
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Position
complement(1706167..1708851)
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AA seq
894 aa
AA seq
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MSDLAKEITPVNIEDELRSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMNVLGNDWN
KAYKKSARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAM
RYTEVRMSKIAHELLADLDKETVDYVPNYDGTEQIPAVLPTKIPNLLINGSSGIAVGMAT
NIPPHNLGEVIDGCLAYIDNEAITIDELMDYIPGPDFPTAALISGRKGIIDAYKTGRGKV
YMRSKAEIETDKNGKETIIVSEIPYQVNKARLIEKIAELVKEKKVEGISALRDESDKDGM
RIVIECKRDAVGEVVLNNLYANTQLQTTFGINMVALDNGQPKLFNLKEMLKCFVDHRREV
VTRRTIFELRKARERAHILEGLALALANIDEIIELIRHAATPAEAKEGLIARGWDLGNVA
AMLERAGTDAARPEWLEPQYGIRDGKYFLTEQQAQAILDLRLHKLTGLEHEKILDEYKQL
LEEIAALMHILASTERLMEVIREELEAIRAGFSDARRTEITAATHDIDMEELIAREDVVV
TLSHEGYVKYQLLSDYEAQRRGGKGKSATKMKEEDYIERLLVANTHDNILLFSTRGKTYR
MKVYQLPLASRTARGKPIVNLLPLEENERITAILPVTEFSEDKFIFMATGDGTVKKTSLD
QFANVRSNGLIALNLRDEDSLIGVDITDGESEIMLFSKFGKVVRFKESEETAVVDENGQP
VLDENGQPEIKFKGVRPMGRTAAGVRGMKLADGDQVVSLIVPKAEGDVLTVTENGYGKRT
SLSEYPTKGRGTQGVVSIKVSERNGSVVGAVQVAEGDEFMMITNAGTLVRTRVAEVSQVG
RNTQGVTLIRTSEGESVVGLQRIDEIEESELLEGEEALVENDAPVAQDDDGEQE
NT seq
2685 nt
NT seq
+upstream
nt +downstream
nt
atgagcgatctagctaaagagatcacgcccgtaaacatcgaagacgagctacgcagttcg
tatttggactacgcgatgtcggttatcgtgggtcgtgctcttcctgatgtgcgtgatggc
cttaaaccagtacaccgacgcgtactgttcgcgatgaatgtgctgggcaacgactggaac
aaagcctataaaaaatctgcccgtgtggtaggtgacgtaatcggtaaatatcaccctcat
ggtgatagtgcggtttacgacaccatcgtgcgtatggcgcagcctttctcacttcgttac
atgttggtcgatggccaaggtaactttggctcgatcgacggcgactccgcggcggcaatg
cgttataccgaagttcgtatgtcgaaaatcgcgcacgaactcttggcagacctagataaa
gaaaccgttgactacgttccgaactatgacggcaccgagcagatccctgctgtattgccg
acgaagattccgaacctgctgatcaacggttcatccggtattgcggttggtatggcaacc
aacattcctccgcacaacttaggtgaagtgatcgatggctgtttagcctacatcgataat
gaagcgatcaccattgatgagttgatggactatattcctggtccagatttcccaaccgca
gcgctgatcagtggccgtaaaggcatcattgacgcgtacaaaaccggccgtggcaaggtt
tacatgcgctcgaaagcggaaatcgaaaccgataagaacggcaaagaaaccatcatcgtc
agcgaaatcccttatcaagtgaacaaagctcgcttgatcgaaaaaatcgctgagttggtg
aaagagaagaaagtcgaaggtatcagcgcactgcgtgacgagtctgataaagacggtatg
cgcattgtgattgagtgcaagcgtgatgcggttggcgaagtggttctgaacaacctgtat
gctaacactcagctgcaaaccaccttcggtatcaacatggtggcactcgataacggtcag
cctaagctgtttaacctgaaagagatgctgaagtgtttcgtcgaccaccgtcgcgaagtg
gtgactcgtcgtactatttttgaactgcgcaaagcgcgtgagcgtgcccatatccttgaa
ggtttggcactggctctggcgaacattgatgaaatcattgaactgatccgtcatgccgcc
acgcctgcagaagcaaaagaaggcttaattgcccgtggttgggatcttggcaacgttgct
gcgatgcttgagcgtgcgggtactgatgctgcgcgtcctgagtggcttgagccacaatac
ggcatccgcgatggcaagtacttcctgactgagcaacaagcgcaagcgattctggatctg
cgtctgcacaagctgactggtctagagcacgagaagatcctcgatgagtacaaacaactt
ctcgaagaaattgctgcgttgatgcacattctggcgagcacagagcgcttgatggaagtg
atccgtgaagagctagaagcgattcgcgctggctttagcgatgcgcgccgcactgaaatt
actgcagcaactcacgacatcgacatggaagagctgatcgcccgtgaagatgtggttgtg
actctgtcacacgaaggttatgtgaagtatcaattactgagcgactacgaagcacagcgt
cgtggtggtaaaggtaagagcgcaaccaaaatgaaagaagaggactacattgagcgtctt
ctggttgccaatacccacgataacattctgctgttctcaactcgcggcaaaacttaccgt
atgaaggtttaccaactgccgttggcaagccgtactgcacgtggtaagccaatcgtgaac
ctgcttcctctggaagaaaatgaacgcatcactgctattctgccagtgactgagttcagc
gaagataaattcatcttcatggcaactggtgacggtactgtgaagaaaacatcgctggat
cagtttgctaacgtacgttctaacggtctgattgcgttgaacctgcgtgacgaagactcg
ctgattggtgttgatatcaccgatggcgaaagcgaaattatgctgttctctaaattcggt
aaagttgttcgctttaaagagtcagaagaaaccgccgttgtggatgaaaatggtcaacca
gttcttgatgaaaatggccagccagagatcaagttcaaaggcgtaagaccaatgggtcgt
accgctgcgggtgttcgcggcatgaaactggctgacggtgaccaagtagtatcgcttatc
gtaccgaaggccgaaggtgacgtgctaacagtaaccgaaaatggttacggtaagcgtacc
agcctgtctgaatacccaaccaaaggtcgtggtactcagggtgttgtttcgatcaaagtc
tctgagcgtaacggcagcgtagtgggtgcagtacaagtggccgagggtgatgagttcatg
atgatcaccaatgccggcacactggtacgtactcgtgtggcggaagtaagccaagtgggc
cgtaatactcaaggcgttaccctgatccgtacttcggaaggtgaaagtgtggtgggtctg
cagcgtatcgatgaaatcgaagagtcggaattgctagaaggtgaggaagcgctcgtcgag
aacgatgcacctgttgcacaagatgatgatggtgaacaagagtaa
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