Vibrio cholerae O49 1154-74: VAA049_1896
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Entry
VAA049_1896 CDS
T03828
Name
(GenBank) bacterial extracellular solute-binding family protein
KO
K11069
spermidine/putrescine transport system substrate-binding protein
Organism
vcx
Vibrio cholerae O49 1154-74
Pathway
vcx02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vcx00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VAA049_1896
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcx02000
]
VAA049_1896
Transporters [BR:
vcx02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Spermidine/putrescine transporter
VAA049_1896
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_1
SBP_bac_11
Lipoprotein_8
CdiA_helical
PrpR_N
Motif
Other DBs
NCBI-ProteinID:
AKB03069
LinkDB
All DBs
Position
complement(2102528..2103559)
Genome browser
AA seq
343 aa
AA seq
DB search
MKTFIKGLVLSAVVASSQVYAEQTLNVYAWGGYLPEKSLKAFEQQEGVTINYSTFENNES
MYTKLKLLKGTGYDVVFASAYFIEKMGREGLLAEIDHNQIPNMKDAMPTVLGLAHDPQNK
FSLPYIWGITGLYYNSSTLPNGITKWANLWDKQYEQQVMLIDDIRDVFGMALKLNGFSIN
TKNEEEIKKAYESLVALKKNVLLYNSDAPHVPYVSGEATLGMQWNGNAYQGQVEMPELKF
VMPEEGAVLWMDNFTIPSGSKNIPLAHKFINFMYQPENQAEIVQSLGYASATKGGRALLP
AELRDNPTIFPSDEDMKKGEFINDVGPETLAIYEKYWQRLRNQ
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactttcattaaaggattggtactttctgcagtcgttgcctcttctcaggtttat
gcagagcaaaccctaaacgtgtatgcgtggggtggctatctgccagagaagtcgctgaaa
gcttttgaacaacaagaaggcgttactattaactattcaacctttgagaataatgagtca
atgtataccaaactcaaacttctgaaaggcactggttacgatgtcgtatttgcgtccgct
tattttatcgaaaagatgggccgtgaagggctactggcagaaatcgatcataaccaaatc
ccgaacatgaaagatgcaatgccaaccgtattaggactggcgcacgatcctcaaaacaaa
ttctcactcccttacatttgggggattacgggcctttactacaactcgtctaccctgcct
aacggcatcacaaaatgggcaaatctgtgggataagcaatacgaacagcaagtcatgctg
attgacgatatccgcgacgtgtttggtatggctctaaagcttaacggctttagcatcaac
accaaaaatgaagaggaaatcaagaaagcgtacgaatctctggtggcactgaagaaaaac
gtattgctgtataactcagatgcgccacacgtgccttacgtttctggcgaagccacactg
ggcatgcagtggaacggcaacgcttaccaaggccaagtggaaatgcctgagctgaaattc
gttatgccagaagaaggcgcggtactgtggatggataacttcaccattccttcaggcagc
aagaacattccgttagcgcacaagtttattaactttatgtaccaaccagaaaaccaagct
gagattgtacaaagcttaggttatgcctcagcaaccaaaggcggtcgagcgctgctaccg
gcagaactgcgtgataacccgactatcttcccatcggatgaagatatgaaaaaaggcgag
ttcatcaacgatgtcggcccagaaacgctggcgatttatgagaagtactggcagcgccta
agaaaccaataa
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