Vibrio cholerae O49 1154-74: VAA049_1939
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Entry
VAA049_1939 CDS
T03828
Name
(GenBank) hypothetical protein
KO
K01581
ornithine decarboxylase [EC:
4.1.1.17
]
Organism
vcx
Vibrio cholerae O49 1154-74
Pathway
vcx00330
Arginine and proline metabolism
vcx00480
Glutathione metabolism
vcx01100
Metabolic pathways
vcx01110
Biosynthesis of secondary metabolites
vcx04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
vcx00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
VAA049_1939
09106 Metabolism of other amino acids
00480 Glutathione metabolism
VAA049_1939
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
VAA049_1939
Enzymes [BR:
vcx01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.17 ornithine decarboxylase
VAA049_1939
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OKR_DC_1
OKR_DC_1_C
OKR_DC_1_N
Beta_elim_lyase
GKRP_SIS_2
Motif
Other DBs
NCBI-ProteinID:
AKB04439
LinkDB
All DBs
Position
2157151..2159313
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AA seq
720 aa
AA seq
DB search
MNSLKIATSLSVRSCFVTQREVVDVLKTDFCDIGAAVVSVEDVQNGIIDKMNATGLKLPI
FVAVCCEDQFPDDFCADITGVFELCDAKVEFYGKQVETAVRRYQESLLPPFFGTLKKYVD
MGNSTFACPGHQGGQFFRKHPVGRQFFDFFGETLFRSDMCNADVRLGDLLIHEGAPHDAQ
AYAAKVYNADKTYFVLNGTSASNKVVCNALLTPGDLVLFDRNNHKSNHHGALIQAGATPV
YLETARNPFGFIGGIDAHCFNESYLRDAVRNVDPSRAEAKRPFRLAIIQLGTYDGTIYNA
RQVVDRIGHLCDYILFDSAWVGYEQFIPMMKDCSPLLLDLKPEDPGIIVTQSVHKQQAGF
SQTSQIHKKDHHIKGQERYCNHKRFNNAFMLHASTSPFYPLFAALDVNAKMHEGDSGRYL
WREAVKTGIEARKLLMKKCKYIKPFIPPMIEGKPWQSHPTEQIADDLRFFEFEPGQKWHA
FEGYEHGQYFVDPCKFLLTTPGIDPETGEYEHFGIPATILANFLRENNIIPEKCDLNSIL
FLLTPAEDMAKMQHLVAQIARFERLIEEDAPLSEVLPNVYRANRERYKGYTIRQLCQEMH
DLYVSHDVKQLQKEMFRARYFPRAVMNPQEANLAFVRGQVELVPLREVEGRIAAEGALPY
PPGVLCVVPGEIWGGSVQRYFLALEEGINLLPGFAPELQGVYLEPTGEGRVQAMGYVLKR
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgaattcattaaaaattgctacgagtttatcggttcgctcttgcttcgtcactcaacga
gaagtggtggatgtactgaaaaccgacttctgtgacatcggtgcggcggtggtttccgtc
gaagacgtgcaaaacggcatcatagataaaatgaatgcgaccggtttgaaactgccgatc
tttgttgctgtgtgctgcgaagaccaattcccagatgatttttgcgccgatatcaccggg
gtatttgagctgtgtgatgccaaagtcgagttctacggtaagcaagtggaaactgccgtg
cgtcgttatcaagaaagtttgttgccacctttctttggtacattgaaaaaatacgtggac
atgggtaactcgacctttgcttgccctggtcatcaaggcggtcagttcttccgtaagcat
ccagttggtcgccagttctttgatttctttggtgaaaccttgttccgctcggatatgtgt
aacgcggacgtacgtttgggtgacttgctgatccatgaaggtgccccacatgatgcgcag
gcttacgctgcgaaagtgtacaacgcggataaaacctacttcgtactcaacggcacatcg
gcctccaacaaagtggtgtgtaacgcgctgctgacaccgggagatctggtgctgtttgac
cgcaacaaccataaatccaaccaccacggtgcgttaattcaagcgggggctactccggtt
tacttagaaacggcgcgtaacccatttggttttatcggtgggattgatgcgcactgcttt
aacgaatcttacctgcgcgatgcggtacgtaatgttgacccaagccgcgcggaggcgaaa
cgtccattccgtcttgccatcattcagctcggtacttacgacggtacgatttacaacgcg
cgtcaggtggtggatcgcatcggtcatctgtgtgactacatcctgtttgactctgcatgg
gtgggctatgaacagttcattccaatgatgaaagattgctcgccacttcttctcgatcta
aagcctgaagatccgggcatcatcgtcactcagtccgtgcataaacagcaggcaggtttc
tcgcaaacttcgcaaattcacaagaaagatcaccacatcaaaggtcaagagcgttactgc
aaccataaacgctttaacaacgcctttatgctgcacgcctcaaccagcccattctacccg
ctatttgcggcgctcgatgtgaacgccaagatgcacgaaggggacagtggccgctaccta
tggcgtgaagcggtgaaaaccggtatcgaagcccgtaagcttctgatgaaaaaatgtaaa
tacatcaagccgttcattccaccaatgatcgaaggtaaaccttggcagtctcaccccacc
gagcaaattgccgatgacttgcgtttcttcgaatttgaaccgggtcagaaatggcatgcg
tttgaaggttacgaacatggtcagtatttcgttgacccttgtaagttcctgctcaccaca
ccggggattgacccagaaaccggcgaatacgagcactttggtattccggccaccatactg
gccaacttcctgcgtgagaacaacatcatcccagagaagtgcgatttgaactctatcctc
ttcctgctcaccccagccgaagatatggcgaagatgcagcatttagtggcgcaaattgcg
cgttttgaacgcttgattgaagaagatgcaccactgagcgaagtattgccgaacgtgtac
cgcgcgaatcgcgaacgctacaaaggctacaccatccgtcagttgtgtcaggaaatgcac
gatctgtatgtcagccatgatgtgaaacagctgcaaaaagagatgttccgcgcgcgttat
ttcccacgtgcggtaatgaacccacaagaagcgaacttggcctttgtacgtggtcaggtt
gagctagtcccactgcgtgaagtggaaggccgtatcgccgctgaaggcgcactgccttac
cctccaggtgtgttgtgtgtggttccgggagaaatttggggcggttcagtacagcgttat
ttcctcgctctggaagaaggcattaacttgctgccgggctttgctcctgaattacaaggg
gtctatctggagccgacaggtgagggacgagtacaggcaatgggttatgtactgaaacgt
taa
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