Vibrio cholerae O49 1154-74: VAA049_2018
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Entry
VAA049_2018 CDS
T03828
Symbol
nikE
Name
(GenBank) nickel import ATP-binding protein NikE
KO
K10823
oligopeptide transport system ATP-binding protein
K15583
oligopeptide transport system ATP-binding protein
Organism
vcx
Vibrio cholerae O49 1154-74
Pathway
vcx01501
beta-Lactam resistance
vcx02010
ABC transporters
vcx02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vcx00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
VAA049_2018 (nikE)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
VAA049_2018 (nikE)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
VAA049_2018 (nikE)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vcx02000
]
VAA049_2018 (nikE)
Transporters [BR:
vcx02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
VAA049_2018 (nikE)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
oligo_HPY
AAA_21
AAA_29
AAA_22
FtsK_SpoIIIE
AAA_16
nSTAND1
RsgA_GTPase
MMR_HSR1
Mg_chelatase
nSTAND3
AAA_23
DUF2813
DUF87
AAA_13
AAA_7
SLFN-g3_helicase
P-loop_TraG
Motif
Other DBs
NCBI-ProteinID:
AKB02552
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Position
complement(2247614..2249233)
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AA seq
539 aa
AA seq
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MSPNPLLQVRNLSVSFTTNDGVVDAVKNVSFDIRPGETLAIVGESGSGKSVSTNALMQLL
PKNARIHPESSIMFEGEELLNKTDTQMRRIRGDRIGMIFQEPMTSLNPYMRVGVQVAEAI
RCHRNVSQNQAKQRVLELFQLVHLPDPKGAYQKFPHEFSGGQLQRIMIAMALINEPDILI
ADEPTTALDVTVQAEVLRLIKEIQANMGMAILFITHDLGVVKFVADRVLVMCKGDVVEQG
STEQLFQQPEHDYTRMLINSIPKGSKDPVALDAPPLLKAEDIRVKFLVKPHFISRHNQYF
EAVKGISLELKQGETLGIVGESGSGKSTLGRALIGLLPSTGQIAFKGQDFRALNEKQRLA
LKKDIQMVFQDPYGSLSPRMTVGEIITEGLLVHQPHISKLERMQRARRALEEVRLDPNSI
NRYPHEFSGGQRQRIAIARALILEPSFILLDEPTSALDRSVQLTVIELLKEIQKRRNIGY
LFISHDLAVVKALSDRVLVMQKGQVMEQGSAESIFHNPQHEYTKKLIAASFDILEENAA
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgtcacccaatccacttttgcaagttcgtaatttaagcgtgagctttaccaccaatgat
ggtgttgtcgatgcggtgaaaaacgtcagctttgatatacgccccggagaaacccttgcg
attgttggtgagtccggtagtggtaaatcggtttcgaccaacgccttgatgcaactgctg
cctaaaaacgcgcggatccatccagaatcgagcattatgtttgaaggtgaagaactgctc
aataaaacggacacgcagatgcgccgcatccgtggggatcggattggcatgatcttccaa
gagccgatgacctcgctcaatccctatatgcgtgttggcgttcaagttgctgaagccatt
cgttgccaccgtaatgtcagccagaatcaagcgaaacagcgagtcttggagctgtttcag
ctcgttcatctgcccgacccaaaaggcgcttaccaaaaattcccgcatgagttttccggt
ggtcagttacagcgcattatgattgcgatggcactgatcaatgagccggatattttgatc
gcagatgaaccgaccacggcgctcgatgtgacagttcaagccgaagtgctccggctcatc
aaagagatccaagccaatatgggcatggcgattttgtttatcacccacgatttaggtgtg
gtgaaatttgttgccgaccgagtgctggtaatgtgtaaaggggatgtggtagagcaaggc
tctactgaacagcttttccagcaacctgagcatgattacacacgcatgctgattaactcg
atacccaaaggcagtaaagacccagtagcgctggatgcgccccctttgctgaaagccgag
gacatccgcgtgaagtttttggtcaaaccgcactttatcagcagacataaccaatacttt
gaagcagtgaaagggatttctcttgaactcaagcaaggtgaaactctcggtatcgtaggc
gaatctggcagcggaaaatccacattagggcgagctttgattggtttactgccttccacg
ggtcagattgccttcaaagggcaagactttcgcgctttgaacgagaaacagcgcttagcc
ctgaagaaagacattcagatggtgtttcaagacccttatggctcgctttctccacgtatg
accgttggcgaaatcatcactgaagggcttttggttcaccaacctcacatcagtaagttg
gaacgtatgcaacgggcgagacgagcgctcgaagaagtgcgattagatccgaattcgatt
aatcgttacccacatgagttctccggcggtcaacgtcagcggattgcgattgctcgggcg
ctaattctggaaccttcctttattttattggatgagcccacttcagcgctggatcgctcc
gtacaactgacggtcattgaactgctaaaagagattcaaaaacgacgcaacatcggctat
ctgttcatcagccacgatcttgccgtggtaaaagcgttatcggatcgcgtgttagtgatg
caaaaagggcaagtgatggaacaaggcagtgcggaatccatcttccataatccacaacat
gaatacaccaagaaactgatcgctgcctccttcgatattctggaagaaaatgcagcatga
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