Vibrio cholerae O49 1154-74: VAA049_2162
Help
Entry
VAA049_2162 CDS
T03828
Name
(GenBank) FAD binding domain of DNA photolyase family protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
vcx
Vibrio cholerae O49 1154-74
Brite
KEGG Orthology (KO) [BR:
vcx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcx03400
]
VAA049_2162
Enzymes [BR:
vcx01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
VAA049_2162
DNA repair and recombination proteins [BR:
vcx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
VAA049_2162
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
Motif
Other DBs
NCBI-ProteinID:
AKB04330
LinkDB
All DBs
Position
2414918..2416468
Genome browser
AA seq
516 aa
AA seq
DB search
MRYSVVRLILGDQLNHAHSWFSEHRDDVLYLIAELHQEQEYVRHHIQKQCAFFAAMQAFA
DYLSAEGHHVWHLDLDASAQYNDLPDLIAQICQQVQADAFQYQRPDEYRLLEQMANLRLS
GITIGCVDTEHFLLPFAEIPEQFPASKAVLMEHFYRRMRKRFGYLMTADGKPEGGQWNFD
ADNRNKLKAPDLLQLPTPLCFDNPVASIKARLERHRIPYIGRVGESLLWPINRAQALSLL
AHFCQICLPNFGRFQDAMTAQHPHRWSLYHSRLSFALNSKLLSPREVIEATISAYRAAQG
QISLAQVEGFVRQILGWREYVRGMYWSNMPHYQTRNHLGAQRPLPSYFWNGQTKMRCLQQ
AITQSLDFGYAHHIQRLMVTGNFALLTECDPDQVDAWYLGIYIDAIEWVELPNTRGMALF
ADGGLIATKPYSASGSYINKMSDYCASCAYQVKLKSGEKACPLNSLYWRFMLKHRDRLAN
NPRIGMLYKTWDKMTSDSQQAILSTADAYLSQIESL
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgcgctattccgttgtgcgattgatattgggtgaccaactcaaccatgctcattcttgg
ttttctgagcatagggatgatgttttatacctgattgcagagctgcatcaggagcaggag
tacgttcgccatcacattcaaaagcagtgtgcattttttgcggccatgcaagcttttgct
gattatttaagtgcagaaggtcatcacgtatggcatctggatctggatgccagcgcgcaa
tataacgatttacccgatctgatcgcgcagatttgccagcaagttcaggccgatgctttt
caataccaaagacctgacgagtatcggctgcttgagcaaatggccaatttgcgcctatcc
ggcatcacaatagggtgcgttgatactgagcacttcttgctaccgtttgcagagatccca
gagcaatttcccgcaagcaaagccgtgctgatggaacacttttatcgacgaatgcgtaag
cgttttggttatttgatgacggcggatggtaaacctgaaggtggacagtggaattttgat
gccgacaatcgtaataaactgaaagcgccagatcttcttcagttgccgacgccactctgt
tttgataatcccgttgcgtccatcaaggcgcgattagaacgtcatcggattccgtatatc
ggacgagtcggagagtcactgctttggcctatcaatcgtgcccaagcgctttccttattg
gcgcatttttgccaaatttgcctgcctaattttggtcgctttcaagatgcgatgacggcg
cagcatccccaccgctggagcctgtatcacagccgactttcatttgcgctcaatagtaag
ctactttcacctcgcgaagtgattgaagccactattagtgcatatcgcgcagctcaaggg
cagatctcgttagctcaagtggaaggatttgtgcgacaaattctcggttggcgtgaatat
gtgcgcggcatgtattggagcaatatgcctcactaccaaacacgcaatcatttaggagcg
cagcggccgttaccaagctatttctggaatggacaaaccaagatgcgttgcttgcagcag
gcgatcactcagtcactggattttggctacgcgcatcatattcaacgcttgatggtgaca
gggaattttgccttgctgaccgagtgtgaccctgatcaagtcgatgcctggtatttaggt
atctatatcgacgcgattgaatgggtcgaacttcctaatacgcgaggtatggctctgttt
gcggatggcggattgatcgccaccaaaccctattcagccagtggttcctacatcaataaa
atgagtgactactgcgcctcttgtgcttatcaagtgaaactcaaatccggtgagaaagcg
tgcccgctaaattcgctttactggcggtttatgcttaaacatcgtgatcgactcgccaac
aatcctcgcatcggaatgctatacaaaacgtgggacaagatgacgagcgattctcagcaa
gcgatcctgagcacggctgatgcgtatctgagccagattgaaagtttataa
DBGET
integrated database retrieval system
