Vibrio cholerae O49 1154-74: VAA049_2298
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Entry
VAA049_2298 CDS
T03828
Symbol
bigR
Name
(GenBank) biofilm growth-associated repressor
KO
K22042
ArsR family transcriptional regulator, virulence genes transcriptional regulator
Organism
vcx
Vibrio cholerae O49 1154-74
Brite
KEGG Orthology (KO) [BR:
vcx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vcx03000
]
VAA049_2298 (bigR)
Transcription factors [BR:
vcx03000
]
Prokaryotic type
Helix-turn-helix
ArsR family
VAA049_2298 (bigR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_5
HTH_20
HxlR
HTH_34
HNF-1_N
DUF7346
YrbL-PhoP_reg
Cdc6_C
HTH_IclR
MCD_N
PaaX
Motif
Other DBs
NCBI-ProteinID:
AKB03720
UniProt:
A0A0F2TQ09
LinkDB
All DBs
Position
2572676..2572993
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AA seq
105 aa
AA seq
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MPEPTTIKIEMDEMKKNAEEVAELLRVMAHPERLMVLCQLTQSEMGVGQLQQGSTLSQSA
FSQHLTVLRKHGIIQARKESQQVFYRLADSRITALIQSLQNVFCR
NT seq
318 nt
NT seq
+upstream
nt +downstream
nt
atgccagaacccaccactatcaagattgaaatggatgaaatgaagaagaatgccgaagaa
gtggctgaattactgcgtgtgatggctcatccagaacgattaatggttctatgccaattg
acgcagagtgagatgggcgtcgggcagcttcaacaaggttcgacgttgagtcaatcggcc
ttttcacaacaccttactgtgctgcgaaagcacggcattatccaagcgcgcaaagaatcg
caacaggtgttttatcgcttggcggacagtcggatcacggcgttgattcaaagtttacag
aatgtgttttgtcgataa
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