Vibrio cholerae O49 1154-74: VAA049_2422
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Entry
VAA049_2422 CDS
T03828
Name
(GenBank) AAA domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
vcx
Vibrio cholerae O49 1154-74
Brite
KEGG Orthology (KO) [BR:
vcx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcx03400
]
VAA049_2422
DNA repair and recombination proteins [BR:
vcx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VAA049_2422
Archaeal homologous recombinant proteins
VAA049_2422
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_21
Motif
Other DBs
NCBI-ProteinID:
AKB02813
LinkDB
All DBs
Position
complement(2704194..2707235)
Genome browser
AA seq
1013 aa
AA seq
DB search
MRPLKLILQAFGPFAGREEIDFTKLGDAPLFLINGATGAGKSSILDAICYALYGETTGSE
RTGDQMRCDYAAPESLTEVIFEFELAGARYQITRQPDQEIPKKRGEGMTKKSHSATLVAL
KADGNELIANKPNPVAKAVVELMGLDVKQFRQVMVLPQGKFRELLTANSKEREQIFGQLF
QTQLYSQIERALFERAAGIRKEKEEFDQQIKGTLSVVGLESEEQLQTELTELAPVLTHAQ
SQLKAEQQQWDETKAHYQAALELEQQFIRKQQLVVEIAAHQEQASHIEMLRQQRQQAQKA
ARLTAVHQQWHQAQKNLLQAKLKVEQQQTLLQQAKAQQQQAQQVSQQASLACEEVPKLNE
QRITWQRAEQKLLAQENVQQAVAKAERELQLATQNALNLQHASEKLEQELQNQRLEWEQQ
QRQLTRLEVQKARMNQLVQQVQAREREQSLFNELQTAQQALLRFEQQHRHIQTQAEQAKL
TADKLEFAWHTQRAAELALALTQNEPCPVCGSLEHPNKAQYSGDVVTKVQVEQARQQQQD
WVQRQQEAFHAWQQQGFKAEQIAQNLTTLSSELTLQQVALLNELIEQQQILHSDIAALQQ
LNPDLLKRQIEEGEQRLAHTKMTLEKQNQNQQQAWQTLAQLQAELASLRQEIPPELSDLD
TLRSAIGRVQNQIEILQKAEHTAREQWVQAQKQFASVQAAHQAAIEAHRESQRQQEETTS
AWQQGLLHSGFSDESAYLAARLTDEAIGNIERQIAQYEERSAMLSGEQQALSRKLAEKNR
PELEPLLVKVTQAEEKMALALQAFTQHQSRMDGLQRVAKQLADLYQKNRALEAEYQVVGT
LSDIANGKTGAKVSLHRFVLGVLLDDVLLQASQRLMKMSRGRYLLKRKEERAKGNVGSGL
DLMVEDSYSGKWRDVATLSGGESFMAALSLALGLSDVVQSYSGGIRLDTLFIDEGFGSLD
PESLDLAIQTLIDLQQGGRTIGIISHVTELKEQIGLRLDVLATRMGSTLRLIT
NT seq
3042 nt
NT seq
+upstream
nt +downstream
nt
atgcgtccgttaaaacttatcctccaagctttcggcccttttgcgggacgagaagagatt
gactttacgaagttgggtgatgctccactgtttttgatcaatggggcaaccggtgcagga
aaaagctcgattctggatgcgatttgctacgccttgtatggcgaaaccacaggcagtgag
cgcaccggcgaccaaatgcgctgcgattatgcggcccctgagtctctcaccgaagtgatt
tttgagtttgagctggcgggggcgcgttaccaaatcacccgtcagcccgatcaagagatc
ccgaaaaaacggggtgaagggatgacgaagaaatcccattccgctactttggttgcactg
aaagcggatggaaatgagctgattgccaacaagcccaatcctgtcgcgaaggcggtggtc
gaattgatgggacttgatgttaagcaatttcgccaagtcatggtgttgcctcaaggcaag
tttcgtgagcttttaaccgccaattcaaaagagcgtgagcagatttttggtcagctcttt
caaacccagctctacagccaaattgaacgggcgctgtttgaacgagcagcgggcattcgt
aaagagaaagaagagtttgatcagcagatcaaaggtacgttaagtgtcgtcggactggaa
agtgaagagcagttacaaaccgagttgaccgaactggctccagtattaacccatgcgcaa
tcacaactcaaagctgagcaacagcagtgggatgaaacaaaagcgcactatcaagctgcg
cttgagttagaacaacaatttatccgcaagcagcaattggtggtagaaatcgccgctcac
caagagcaggcttcgcacatcgaaatgctgcgtcagcaacgccagcaagcccaaaaagca
gcgcgtttaaccgccgtccatcaacagtggcaccaagctcaaaaaaacctactgcaagct
aagcttaaggttgagcaacagcagactctgttgcaacaggcgaaagctcagcagcaacaa
gctcaacaggtcagtcagcaagccagtttagcctgtgaagaagtacccaaattaaacgag
caacgcatcacgtggcagcgtgctgagcaaaaattgctggcacaagaaaatgttcagcaa
gcggtggccaaggctgagcgtgaactgcaactggcgacacaaaatgcgcttaatttgcag
catgcgagcgaaaagctagagcaagagctacaaaaccaacgactcgaatgggaacagcaa
cagcgccaattaacgcgcttagaagttcaaaaagcgcgaatgaatcagttggtgcagcaa
gttcaggctcgcgagcgagaacaatcgttattcaatgaattacaaactgctcaacaagct
ttattgcgctttgagcagcaacatcgccacatccaaactcaggccgaacaagcgaaactg
accgcggataaactggagttcgcatggcatacccagagggctgcggagcttgctctcgca
ctcacacaaaatgaaccttgtccggtgtgcggcagtttagagcatcccaataaagctcaa
tattcgggtgacgttgtcaccaaggttcaggttgaacaagccagacagcagcaacaagat
tgggtgcagcgtcagcaagaggcattccatgcttggcagcaacaagggtttaaagccgag
cagatagcgcaaaatctcacgactttatcgagtgagctgactttgcagcaagtggcgtta
ttgaacgagctcattgaacagcaacaaatactgcacagtgatattgctgcgctacaacag
cttaaccctgatttgctgaaacggcagattgaagagggggagcagcggttagcgcacacc
aaaatgacgctcgaaaaacagaatcaaaaccagcaacaagcttggcagactttggctcaa
ttacaggcggaattggcgagtttgcgccaagaaatcccgccggagctgtccgatcttgat
actttacgaagcgcgattgggcgtgtgcagaaccaaatagaaatcttacaaaaagcggag
catacggctcgtgagcagtgggtgcaggcgcaaaagcagtttgccagtgtgcaggcggct
catcaggcggcgattgaagcacaccgtgagtctcagcgtcaacaggaggaaaccacaagc
gcatggcagcaagggttactccattctggatttagcgatgagtccgcctatcttgccgct
cgtttaactgatgaggctatcggcaatatcgagcgccaaatcgcccagtatgaagagcgc
agtgcgatgctcagtggcgaacagcaagccttatcacgtaaattagcagagaagaatcgc
ccagagctggaaccacttcttgtcaaagtaactcaagctgaagaaaaaatggcactggcg
ttgcaggcgtttacgcaacatcaatcgcggatggatggattgcaacgtgtcgccaagcaa
ctggcggatctgtaccagaaaaatcgtgcattagaagccgaatatcaggtcgtgggtacc
ttaagtgatattgcgaatggcaaaacgggcgctaaagtcagcttacatcgctttgtgctt
ggtgttttgctggatgatgtcttgttacaagcttctcaacgactgatgaaaatgagtcga
ggccgctatttactcaaacgtaaagaggaacgcgctaaaggtaatgtgggctcagggctg
gatttgatggtcgaagatagctacagcggtaaatggcgtgatgtggcaaccttgtccggt
ggtgaatcgttcatggccgccttatcgcttgcgcttggtttatccgatgtggttcagtct
tacagtggcggtatccgtcttgatactctgtttattgatgaaggttttggtagtttggat
ccggaatctttagatttagcgatccaaaccctaatcgatcttcagcaaggtggccgaacg
ataggaatcatctctcatgttaccgagctgaaagagcagatcggtctaagattggatgtg
ttggcgacaagaatgggtagcacgctgcgtttaatcacataa
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