Vibrio cholerae O49 1154-74: VAA049_2423
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Entry
VAA049_2423 CDS
T03828
Symbol
sbcD
Name
(GenBank) exonuclease SbcCD, D subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
vcx
Vibrio cholerae O49 1154-74
Brite
KEGG Orthology (KO) [BR:
vcx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcx03400
]
VAA049_2423 (sbcD)
DNA repair and recombination proteins [BR:
vcx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VAA049_2423 (sbcD)
Archaeal homologous recombinant proteins
VAA049_2423 (sbcD)
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GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
AKB01964
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Position
complement(2707237..2708376)
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AA seq
379 aa
AA seq
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MKFLHTSDWHLGRQFHQVSLLDDQSAVLAQLIDFLRDNPVDAVIVSGDIYDRSIPPTAAI
DLLDEVVSVICGELKTPLLMIPGNHDGAKRLRFAAKQMKNSGLHIFADFEQMMQPLVLHS
PQAGEVAFWGMPYHDPELVRHYYHNDITTHDAAHQFLCESILAQCDPSQRHVLISHCFVD
GAMESESERPLSIGGSDRVDHRHFLPFDYVALGHLHQPQMKGAKHIRYSGSLMKYSFGEQ
HQNKGATLVELGQQGFISATHVPLIAPHQMRIIEGELEAILAAGATDPQADDYLLVRLLD
KHAILDPMEKLRQVYPNVLHLEKPGMLIGVDQEMGKARLARGELDMFRDFFLEAKREPLS
EQQEKVVIEVIARLKAEGI
NT seq
1140 nt
NT seq
+upstream
nt +downstream
nt
atgaagtttctacatacttcggattggcatcttggtcgccaatttcatcaagtctcatta
ttagatgatcaaagcgctgttctcgcacaactgatcgactttctgcgcgacaatccggtg
gatgccgtgattgtctctggcgatatttatgatcggtcgattccacccacggcggcgatt
gatttattggatgaagtggtcagcgtgatctgtggcgagctgaagacacctttattgatg
atcccgggcaatcacgatggtgcgaagcgtttacgctttgctgcgaagcagatgaaaaat
tcgggcttacatatctttgctgattttgaacagatgatgcagccacttgtgctgcattca
ccgcaagcgggcgaggtcgctttctggggaatgccgtatcacgaccctgagttagtgcgc
cactactatcacaacgacatcaccacgcatgacgctgcacaccaatttttgtgcgagagt
attcttgctcagtgcgatccgtcacaacgtcacgtattgatcagccactgttttgtcgat
ggcgcgatggagtctgaatctgagcggccattatcgattggtggctcagatcgtgttgac
catcgccattttttgccttttgactacgtcgcgcttgggcatttacaccagccgcaaatg
aaaggcgcgaaacacattcgctactctggctcattgatgaaatacagcttcggtgagcag
caccaaaacaaaggcgctaccttggtagaactgggtcagcaaggttttatcagcgcaacg
catgttcctctcatcgcgcctcatcaaatgcgcattatcgagggagagttggaggcgatt
cttgcagcgggagccaccgacccgcaggcagacgattacctgctagtgcgtcttttggat
aagcatgccattctcgacccgatggaaaagctgcgtcaggtttatcccaatgtgctgcat
cttgaaaagccgggcatgttgattggtgtggatcaagagatgggcaaggcacgattggcg
cgaggggaattggatatgtttcgtgattttttccttgaggcgaaacgtgaacctctgagt
gagcagcaagagaaagtggtgattgaggtgattgcgcgcctgaaagcggagggcatttaa
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