Vibrio cholerae O49 1154-74: VAA049_2510
Help
Entry
VAA049_2510 CDS
T03828
Name
(GenBank) hypothetical protein
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
vcx
Vibrio cholerae O49 1154-74
Pathway
vcx03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
vcx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
VAA049_2510
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vcx03400
]
VAA049_2510
Enzymes [BR:
vcx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
VAA049_2510
DNA repair and recombination proteins [BR:
vcx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
VAA049_2510
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VAA049_2510
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
VAA049_2510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AKB02409
LinkDB
All DBs
Position
2782333..2783757
Genome browser
AA seq
474 aa
AA seq
DB search
MQQEHQPTFFFFDYETWGVNPAKDRPSQFAGVRTDMDFNIIGEPLVIYCQLPNDYLPAPE
AALITGITPQKANSQGLAEPEFIARIHAELSTPNTTSLGYNSIRFDDEVTRYTCYRNFID
PYAWSWQHGNSRWDLLDVLRACHALRPEGIEWPENDDGFTSFKLEHLSVANGIEHSNAHD
AMADVIATIELAKKVKAAQPKLFDYFFTMRHKRKLTELIDIVNQTPLMHVSGMLGRERHY
TSWIVPIAWHPTNQNAVIVVDLGKDPQPLLELDAETLQARLYTRYEDLAPDELPVPVKLV
HLNKCPILAPAKTLTAENAEKIGIDREQCLAHLNMIRQHPEIREKLVTVFSQEREFAKEN
NVDSQLYDGFFSPADRAAMEIIRTTSPDNLGSLEIKVADKRIEPLLFRYRARHYPQTLTD
AEQRRWAAHCRDYFERNLESYMLNLENLVHEHQTDEKKMAILKSVYHYVEKLAH
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgcagcaagaacaccagcccacattcttcttctttgactacgagacttggggagtcaat
cccgccaaagatcgtcctagtcagtttgcgggtgtgcgtaccgatatggacttcaacatc
atcggtgagcctttggtaatttactgtcagctgcccaacgactatttacctgcccctgag
gccgcattgatcacagggatcacccctcaaaaagccaatagccaaggtctggcggagccc
gaatttatcgcgcgtattcatgctgagctctccacacccaataccaccagcctaggttat
aacagtatacgttttgatgatgaagtgacgcgctacacctgctatcgcaactttatcgac
ccctatgcttggagctggcaacacggcaattctcgttgggatctgctggatgtgcttcgc
gcgtgtcatgctttgcgtcctgaaggtatcgagtggccggaaaatgatgacggcttcacc
agctttaaactggaacatctttctgttgccaacggcattgagcacagcaacgcgcacgat
gcgatggccgatgtgattgccactattgaactggcgaaaaaagtcaaagccgcgcagccg
aaattgttcgactacttcttcactatgcgccacaaacgcaaactgacagaactgattgat
attgtgaaccaaactccgctgatgcatgtttctggcatgcttgggcgtgagcgccactac
accagctggattgtgccgattgcttggcatccgaccaatcaaaatgcggtgattgtggtg
gatttgggtaaagaccctcagccgctgctggagctcgatgccgaaacgctgcaagcacgt
ctctatacgcggtatgaagacctagcgccggatgagctaccagtacccgtgaaattggtg
catctcaataaatgccctattctggctcccgccaagaccctgaccgcagagaatgctgaa
aagattggtattgatcgcgagcagtgtcttgctcacttaaatatgattcgtcagcatcca
gaaattcgtgaaaagctggtgacggtattcagtcaagagcgcgagtttgccaaagaaaac
aatgtggatagccaattgtatgacgggttcttctcgcctgccgatcgtgcggcgatggag
atcattcgcacaacatcaccagataatcttggcagcctagagattaaagtggcagataaa
cgtatcgaacctctgttgttccgttaccgcgctcgccattacccacagaccttaaccgat
gccgagcagcgccgctgggcagcgcattgtcgtgactattttgaacgtaaccttgaaagc
tatatgctcaatttggaaaacttagttcatgaacatcagactgacgaaaagaaaatggcg
attttaaaatccgtttaccattacgttgaaaaactcgctcactaa
DBGET
integrated database retrieval system
